Gene : Medtr7g110620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Description:  NEFA-interacting nuclear protein NIP30, putative
Genomic Order:  5649 Name:  ? Medtr7g110620
Secondary Identifier:  ? PAC:31079208
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g110620 0.5kb upstream 0.5kb upstream 5144 true chr7: 45334764-45339907 Medicago truncatula
Medtr7g110620 0.5kb upstream 0.5kb upstream 500 false chr7: 45339408-45339907 Medicago truncatula
Medtr7g110620 0.5kb downstream 0.5kb downstream 5144 true chr7: 45334264-45339407 Medicago truncatula
Medtr7g110620 0.5kb downstream 0.5kb downstream 500 false chr7: 45334264-45334763 Medicago truncatula
Medtr7g110620 1.0kb upstream 1.0kb upstream 5644 true chr7: 45334764-45340407 Medicago truncatula
Medtr7g110620 1.0kb upstream 1.0kb upstream 1000 false chr7: 45339408-45340407 Medicago truncatula
Medtr7g110620 1.0kb downstream 1.0kb downstream 5644 true chr7: 45333764-45339407 Medicago truncatula
Medtr7g110620 1.0kb downstream 1.0kb downstream 1000 false chr7: 45333764-45334763 Medicago truncatula
Medtr7g110620 2.0kb upstream 2.0kb upstream 6644 true chr7: 45334764-45341407 Medicago truncatula
Medtr7g110620 2.0kb upstream 2.0kb upstream 2000 false chr7: 45339408-45341407 Medicago truncatula
Medtr7g110620 2.0kb downstream 2.0kb downstream 6644 true chr7: 45332764-45339407 Medicago truncatula
Medtr7g110620 2.0kb downstream 2.0kb downstream 2000 false chr7: 45332764-45334763 Medicago truncatula
Medtr7g110620 5.0kb upstream 5.0kb upstream 9644 true chr7: 45334764-45344407 Medicago truncatula
Medtr7g110620 5.0kb upstream 5.0kb upstream 5000 false chr7: 45339408-45344407 Medicago truncatula
Medtr7g110620 5.0kb downstream 5.0kb downstream 9644 true chr7: 45329764-45339407 Medicago truncatula
Medtr7g110620 5.0kb downstream 5.0kb downstream 5000 false chr7: 45329764-45334763 Medicago truncatula
Medtr7g110620 10.0kb upstream 10.0kb upstream 14644 true chr7: 45334764-45349407 Medicago truncatula
Medtr7g110620 10.0kb upstream 10.0kb upstream 10000 false chr7: 45339408-45349407 Medicago truncatula
Medtr7g110620 10.0kb downstream 10.0kb downstream 14644 true chr7: 45324764-45339407 Medicago truncatula
Medtr7g110620 10.0kb downstream 10.0kb downstream 10000 false chr7: 45324764-45334763 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300170 5265 Fabidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.027        
cufflinks 2.102        
cufflinks 2.328        
cufflinks 1.236       Low
cufflinks 2.467       High
cufflinks 1.502        
cufflinks 1.725        
cufflinks 2.106        
cufflinks 1.268       Low

0 Strain