Gene : Medtr7g111050 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Description:  cathepsin B-like cysteine protease
Genomic Order:  5675 Name:  ? Medtr7g111050
Secondary Identifier:  ? PAC:31080789
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g111050 0.5kb upstream 0.5kb upstream 5508 true chr7: 45535648-45541155 Medicago truncatula
Medtr7g111050 0.5kb upstream 0.5kb upstream 500 false chr7: 45540656-45541155 Medicago truncatula
Medtr7g111050 0.5kb downstream 0.5kb downstream 5508 true chr7: 45535148-45540655 Medicago truncatula
Medtr7g111050 0.5kb downstream 0.5kb downstream 500 false chr7: 45535148-45535647 Medicago truncatula
Medtr7g111050 1.0kb upstream 1.0kb upstream 6008 true chr7: 45535648-45541655 Medicago truncatula
Medtr7g111050 1.0kb upstream 1.0kb upstream 1000 false chr7: 45540656-45541655 Medicago truncatula
Medtr7g111050 1.0kb downstream 1.0kb downstream 6008 true chr7: 45534648-45540655 Medicago truncatula
Medtr7g111050 1.0kb downstream 1.0kb downstream 1000 false chr7: 45534648-45535647 Medicago truncatula
Medtr7g111050 2.0kb upstream 2.0kb upstream 7008 true chr7: 45535648-45542655 Medicago truncatula
Medtr7g111050 2.0kb upstream 2.0kb upstream 2000 false chr7: 45540656-45542655 Medicago truncatula
Medtr7g111050 2.0kb downstream 2.0kb downstream 7008 true chr7: 45533648-45540655 Medicago truncatula
Medtr7g111050 2.0kb downstream 2.0kb downstream 2000 false chr7: 45533648-45535647 Medicago truncatula
Medtr7g111050 5.0kb upstream 5.0kb upstream 10008 true chr7: 45535648-45545655 Medicago truncatula
Medtr7g111050 5.0kb upstream 5.0kb upstream 5000 false chr7: 45540656-45545655 Medicago truncatula
Medtr7g111050 5.0kb downstream 5.0kb downstream 10008 true chr7: 45530648-45540655 Medicago truncatula
Medtr7g111050 5.0kb downstream 5.0kb downstream 5000 false chr7: 45530648-45535647 Medicago truncatula
Medtr7g111050 10.0kb upstream 10.0kb upstream 15008 true chr7: 45535648-45550655 Medicago truncatula
Medtr7g111050 10.0kb upstream 10.0kb upstream 10000 false chr7: 45540656-45550655 Medicago truncatula
Medtr7g111050 10.0kb downstream 10.0kb downstream 15008 true chr7: 45525648-45540655 Medicago truncatula
Medtr7g111050 10.0kb downstream 10.0kb downstream 10000 false chr7: 45525648-45535647 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296168 5265 Fabidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.355       Low
cufflinks 1.87        
cufflinks 1.553        
cufflinks 0.996        
cufflinks 1.767        
cufflinks 0.335       Low
cufflinks 1.064        
cufflinks 1.471        
cufflinks 1.384        

0 Strain