Gene : Medtr7g111870 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR10529 - LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED Description:  clathrin adaptor complexes medium subunit family protein
Genomic Order:  5731 Name:  ? Medtr7g111870
Secondary Identifier:  ? PAC:31077249
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g111870 0.5kb upstream 0.5kb upstream 4707 true chr7: 45960304-45965010 Medicago truncatula
Medtr7g111870 0.5kb upstream 0.5kb upstream 500 false chr7: 45960304-45960803 Medicago truncatula
Medtr7g111870 0.5kb downstream 0.5kb downstream 4707 true chr7: 45960804-45965510 Medicago truncatula
Medtr7g111870 0.5kb downstream 0.5kb downstream 500 false chr7: 45965011-45965510 Medicago truncatula
Medtr7g111870 1.0kb upstream 1.0kb upstream 5207 true chr7: 45959804-45965010 Medicago truncatula
Medtr7g111870 1.0kb upstream 1.0kb upstream 1000 false chr7: 45959804-45960803 Medicago truncatula
Medtr7g111870 1.0kb downstream 1.0kb downstream 5207 true chr7: 45960804-45966010 Medicago truncatula
Medtr7g111870 1.0kb downstream 1.0kb downstream 1000 false chr7: 45965011-45966010 Medicago truncatula
Medtr7g111870 2.0kb upstream 2.0kb upstream 6207 true chr7: 45958804-45965010 Medicago truncatula
Medtr7g111870 2.0kb upstream 2.0kb upstream 2000 false chr7: 45958804-45960803 Medicago truncatula
Medtr7g111870 2.0kb downstream 2.0kb downstream 6207 true chr7: 45960804-45967010 Medicago truncatula
Medtr7g111870 2.0kb downstream 2.0kb downstream 2000 false chr7: 45965011-45967010 Medicago truncatula
Medtr7g111870 5.0kb upstream 5.0kb upstream 9207 true chr7: 45955804-45965010 Medicago truncatula
Medtr7g111870 5.0kb upstream 5.0kb upstream 5000 false chr7: 45955804-45960803 Medicago truncatula
Medtr7g111870 5.0kb downstream 5.0kb downstream 9207 true chr7: 45960804-45970010 Medicago truncatula
Medtr7g111870 5.0kb downstream 5.0kb downstream 5000 false chr7: 45965011-45970010 Medicago truncatula
Medtr7g111870 10.0kb upstream 10.0kb upstream 14207 true chr7: 45950804-45965010 Medicago truncatula
Medtr7g111870 10.0kb upstream 10.0kb upstream 10000 false chr7: 45950804-45960803 Medicago truncatula
Medtr7g111870 10.0kb downstream 10.0kb downstream 14207 true chr7: 45960804-45975010 Medicago truncatula
Medtr7g111870 10.0kb downstream 10.0kb downstream 10000 false chr7: 45965011-45975010 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299453 5265 Fabidae View MSA
124067880 5270 Rosid View MSA
123739903 5271 Pentapetalae View MSA
122788597 5272 Eudicot View MSA
122044691 5273 Angiosperm View MSA
121345479 5274 Embryophyte View MSA
123425164 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.545        
cufflinks 0.97        
cufflinks 1.085        
cufflinks 0.781        
cufflinks 1.263        
cufflinks 0.172       Low
cufflinks 0.827        
cufflinks 0.803        
cufflinks 1.04        

0 Strain