Gene : Medtr7g111530 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Description:  fungal proteinase A, aspartic proteinase superfamily protein
Genomic Order:  5708 Name:  ? Medtr7g111530
Secondary Identifier:  ? PAC:31080956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g111530 0.5kb upstream 0.5kb upstream 5010 true chr7: 45773404-45778413 Medicago truncatula
Medtr7g111530 0.5kb upstream 0.5kb upstream 500 false chr7: 45777914-45778413 Medicago truncatula
Medtr7g111530 0.5kb downstream 0.5kb downstream 5010 true chr7: 45772904-45777913 Medicago truncatula
Medtr7g111530 0.5kb downstream 0.5kb downstream 500 false chr7: 45772904-45773403 Medicago truncatula
Medtr7g111530 1.0kb upstream 1.0kb upstream 5510 true chr7: 45773404-45778913 Medicago truncatula
Medtr7g111530 1.0kb upstream 1.0kb upstream 1000 false chr7: 45777914-45778913 Medicago truncatula
Medtr7g111530 1.0kb downstream 1.0kb downstream 5510 true chr7: 45772404-45777913 Medicago truncatula
Medtr7g111530 1.0kb downstream 1.0kb downstream 1000 false chr7: 45772404-45773403 Medicago truncatula
Medtr7g111530 2.0kb upstream 2.0kb upstream 6510 true chr7: 45773404-45779913 Medicago truncatula
Medtr7g111530 2.0kb upstream 2.0kb upstream 2000 false chr7: 45777914-45779913 Medicago truncatula
Medtr7g111530 2.0kb downstream 2.0kb downstream 6510 true chr7: 45771404-45777913 Medicago truncatula
Medtr7g111530 2.0kb downstream 2.0kb downstream 2000 false chr7: 45771404-45773403 Medicago truncatula
Medtr7g111530 5.0kb upstream 5.0kb upstream 9510 true chr7: 45773404-45782913 Medicago truncatula
Medtr7g111530 5.0kb upstream 5.0kb upstream 5000 false chr7: 45777914-45782913 Medicago truncatula
Medtr7g111530 5.0kb downstream 5.0kb downstream 9510 true chr7: 45768404-45777913 Medicago truncatula
Medtr7g111530 5.0kb downstream 5.0kb downstream 5000 false chr7: 45768404-45773403 Medicago truncatula
Medtr7g111530 10.0kb upstream 10.0kb upstream 14510 true chr7: 45773404-45787913 Medicago truncatula
Medtr7g111530 10.0kb upstream 10.0kb upstream 10000 false chr7: 45777914-45787913 Medicago truncatula
Medtr7g111530 10.0kb downstream 10.0kb downstream 14510 true chr7: 45763404-45777913 Medicago truncatula
Medtr7g111530 10.0kb downstream 10.0kb downstream 10000 false chr7: 45763404-45773403 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.259     High  
cufflinks 43.578     High  
cufflinks 95.27     High High
cufflinks 51.192     High  
cufflinks 42.623     High  
cufflinks 32.335     High Low
cufflinks 46.818     High  
cufflinks 52.933     High  
cufflinks 33.724     High  

0 Strain