Gene : Medtr7g112060 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4727 - U1-like Zn-finger protein Description:  zinc finger matrin type 2
Genomic Order:  5745 Name:  ? Medtr7g112060
Secondary Identifier:  ? PAC:31078556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g112060 0.5kb upstream 0.5kb upstream 4936 true chr7: 46064416-46069351 Medicago truncatula
Medtr7g112060 0.5kb upstream 0.5kb upstream 500 false chr7: 46064416-46064915 Medicago truncatula
Medtr7g112060 0.5kb downstream 0.5kb downstream 4936 true chr7: 46064916-46069851 Medicago truncatula
Medtr7g112060 0.5kb downstream 0.5kb downstream 500 false chr7: 46069352-46069851 Medicago truncatula
Medtr7g112060 1.0kb upstream 1.0kb upstream 5436 true chr7: 46063916-46069351 Medicago truncatula
Medtr7g112060 1.0kb upstream 1.0kb upstream 1000 false chr7: 46063916-46064915 Medicago truncatula
Medtr7g112060 1.0kb downstream 1.0kb downstream 5436 true chr7: 46064916-46070351 Medicago truncatula
Medtr7g112060 1.0kb downstream 1.0kb downstream 1000 false chr7: 46069352-46070351 Medicago truncatula
Medtr7g112060 2.0kb upstream 2.0kb upstream 6436 true chr7: 46062916-46069351 Medicago truncatula
Medtr7g112060 2.0kb upstream 2.0kb upstream 2000 false chr7: 46062916-46064915 Medicago truncatula
Medtr7g112060 2.0kb downstream 2.0kb downstream 6436 true chr7: 46064916-46071351 Medicago truncatula
Medtr7g112060 2.0kb downstream 2.0kb downstream 2000 false chr7: 46069352-46071351 Medicago truncatula
Medtr7g112060 5.0kb upstream 5.0kb upstream 9436 true chr7: 46059916-46069351 Medicago truncatula
Medtr7g112060 5.0kb upstream 5.0kb upstream 5000 false chr7: 46059916-46064915 Medicago truncatula
Medtr7g112060 5.0kb downstream 5.0kb downstream 9436 true chr7: 46064916-46074351 Medicago truncatula
Medtr7g112060 5.0kb downstream 5.0kb downstream 5000 false chr7: 46069352-46074351 Medicago truncatula
Medtr7g112060 10.0kb upstream 10.0kb upstream 14436 true chr7: 46054916-46069351 Medicago truncatula
Medtr7g112060 10.0kb upstream 10.0kb upstream 10000 false chr7: 46054916-46064915 Medicago truncatula
Medtr7g112060 10.0kb downstream 10.0kb downstream 14436 true chr7: 46064916-46079351 Medicago truncatula
Medtr7g112060 10.0kb downstream 10.0kb downstream 10000 false chr7: 46069352-46079351 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314756 5265 Fabidae View MSA
124068799 5270 Rosid View MSA
123739727 5271 Pentapetalae View MSA
122792158 5272 Eudicot View MSA
122047848 5273 Angiosperm View MSA
121346040 5274 Embryophyte View MSA
123426715 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.295        
cufflinks 1.419        
cufflinks 1.491        
cufflinks 1.153        
cufflinks 1.619       High
cufflinks 0.578       Low
cufflinks 1.236        
cufflinks 1.285        
cufflinks 0.997        

0 Strain