Gene : Medtr7g102960 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Description:  eukaryotic-type carbonic anhydrase
Genomic Order:  5101 Name:  ? Medtr7g102960
Secondary Identifier:  ? PAC:31081085
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYANCAT-PWY Medicago truncatula pathologic  
Mtruncatula PWY-241 Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  
Mtruncatula PWY-7117 Medicago truncatula pathologic  
Mtruncatula PWYQT-4429 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g102960 0.5kb upstream 0.5kb upstream 3405 true chr7: 41375793-41379197 Medicago truncatula
Medtr7g102960 0.5kb upstream 0.5kb upstream 500 false chr7: 41378698-41379197 Medicago truncatula
Medtr7g102960 0.5kb downstream 0.5kb downstream 3405 true chr7: 41375293-41378697 Medicago truncatula
Medtr7g102960 0.5kb downstream 0.5kb downstream 500 false chr7: 41375293-41375792 Medicago truncatula
Medtr7g102960 1.0kb upstream 1.0kb upstream 3905 true chr7: 41375793-41379697 Medicago truncatula
Medtr7g102960 1.0kb upstream 1.0kb upstream 1000 false chr7: 41378698-41379697 Medicago truncatula
Medtr7g102960 1.0kb downstream 1.0kb downstream 3905 true chr7: 41374793-41378697 Medicago truncatula
Medtr7g102960 1.0kb downstream 1.0kb downstream 1000 false chr7: 41374793-41375792 Medicago truncatula
Medtr7g102960 2.0kb upstream 2.0kb upstream 4905 true chr7: 41375793-41380697 Medicago truncatula
Medtr7g102960 2.0kb upstream 2.0kb upstream 2000 false chr7: 41378698-41380697 Medicago truncatula
Medtr7g102960 2.0kb downstream 2.0kb downstream 4905 true chr7: 41373793-41378697 Medicago truncatula
Medtr7g102960 2.0kb downstream 2.0kb downstream 2000 false chr7: 41373793-41375792 Medicago truncatula
Medtr7g102960 5.0kb upstream 5.0kb upstream 7905 true chr7: 41375793-41383697 Medicago truncatula
Medtr7g102960 5.0kb upstream 5.0kb upstream 5000 false chr7: 41378698-41383697 Medicago truncatula
Medtr7g102960 5.0kb downstream 5.0kb downstream 7905 true chr7: 41370793-41378697 Medicago truncatula
Medtr7g102960 5.0kb downstream 5.0kb downstream 5000 false chr7: 41370793-41375792 Medicago truncatula
Medtr7g102960 10.0kb upstream 10.0kb upstream 12905 true chr7: 41375793-41388697 Medicago truncatula
Medtr7g102960 10.0kb upstream 10.0kb upstream 10000 false chr7: 41378698-41388697 Medicago truncatula
Medtr7g102960 10.0kb downstream 10.0kb downstream 12905 true chr7: 41365793-41378697 Medicago truncatula
Medtr7g102960 10.0kb downstream 10.0kb downstream 10000 false chr7: 41365793-41375792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297584 5265 Fabidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.054     Low  
cufflinks 0.005     Low Low
cufflinks 0.01     Low  
cufflinks 0.058     Low  
cufflinks 0.008     Low Low
cufflinks 0.084     Low  
cufflinks 0.151       High
cufflinks 0.011     Low  
cufflinks 0.104        

0 Strain