Gene : Medtr7g102790 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Description:  PLATZ transcription factor family protein
Genomic Order:  5133 Name:  ? Medtr7g102790
Secondary Identifier:  ? PAC:31079593
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g102790 0.5kb upstream 0.5kb upstream 2882 true chr7: 41628028-41630909 Medicago truncatula
Medtr7g102790 0.5kb upstream 0.5kb upstream 500 false chr7: 41630410-41630909 Medicago truncatula
Medtr7g102790 0.5kb downstream 0.5kb downstream 2882 true chr7: 41627528-41630409 Medicago truncatula
Medtr7g102790 0.5kb downstream 0.5kb downstream 500 false chr7: 41627528-41628027 Medicago truncatula
Medtr7g102790 1.0kb upstream 1.0kb upstream 3382 true chr7: 41628028-41631409 Medicago truncatula
Medtr7g102790 1.0kb upstream 1.0kb upstream 1000 false chr7: 41630410-41631409 Medicago truncatula
Medtr7g102790 1.0kb downstream 1.0kb downstream 3382 true chr7: 41627028-41630409 Medicago truncatula
Medtr7g102790 1.0kb downstream 1.0kb downstream 1000 false chr7: 41627028-41628027 Medicago truncatula
Medtr7g102790 2.0kb upstream 2.0kb upstream 4382 true chr7: 41628028-41632409 Medicago truncatula
Medtr7g102790 2.0kb upstream 2.0kb upstream 2000 false chr7: 41630410-41632409 Medicago truncatula
Medtr7g102790 2.0kb downstream 2.0kb downstream 4382 true chr7: 41626028-41630409 Medicago truncatula
Medtr7g102790 2.0kb downstream 2.0kb downstream 2000 false chr7: 41626028-41628027 Medicago truncatula
Medtr7g102790 5.0kb upstream 5.0kb upstream 7382 true chr7: 41628028-41635409 Medicago truncatula
Medtr7g102790 5.0kb upstream 5.0kb upstream 5000 false chr7: 41630410-41635409 Medicago truncatula
Medtr7g102790 5.0kb downstream 5.0kb downstream 7382 true chr7: 41623028-41630409 Medicago truncatula
Medtr7g102790 5.0kb downstream 5.0kb downstream 5000 false chr7: 41623028-41628027 Medicago truncatula
Medtr7g102790 10.0kb upstream 10.0kb upstream 12382 true chr7: 41628028-41640409 Medicago truncatula
Medtr7g102790 10.0kb upstream 10.0kb upstream 10000 false chr7: 41630410-41640409 Medicago truncatula
Medtr7g102790 10.0kb downstream 10.0kb downstream 12382 true chr7: 41618028-41630409 Medicago truncatula
Medtr7g102790 10.0kb downstream 10.0kb downstream 10000 false chr7: 41618028-41628027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315048 5265 Fabidae View MSA
124069280 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.825        
cufflinks 0.473        
cufflinks 0.441        
cufflinks 0.938        
cufflinks 0.73        
cufflinks 0.303       Low
cufflinks 1.404        
cufflinks 0.441        
cufflinks 2.813       High

0 Strain