Gene : Medtr7g103680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF15628//PF15629 - RRM in Demeter (RRM_DME) // Permuted single zf-CXXC unit (Perm-CXXC) Description:  HhH-GPD base excision DNA repair family protein
Genomic Order:  5181 Name:  ? Medtr7g103680
Secondary Identifier:  ? PAC:31079131
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g103680 0.5kb upstream 0.5kb upstream 9967 true chr7: 41974517-41984483 Medicago truncatula
Medtr7g103680 0.5kb upstream 0.5kb upstream 500 false chr7: 41974517-41975016 Medicago truncatula
Medtr7g103680 0.5kb downstream 0.5kb downstream 9967 true chr7: 41975017-41984983 Medicago truncatula
Medtr7g103680 0.5kb downstream 0.5kb downstream 500 false chr7: 41984484-41984983 Medicago truncatula
Medtr7g103680 1.0kb upstream 1.0kb upstream 10467 true chr7: 41974017-41984483 Medicago truncatula
Medtr7g103680 1.0kb upstream 1.0kb upstream 1000 false chr7: 41974017-41975016 Medicago truncatula
Medtr7g103680 1.0kb downstream 1.0kb downstream 10467 true chr7: 41975017-41985483 Medicago truncatula
Medtr7g103680 1.0kb downstream 1.0kb downstream 1000 false chr7: 41984484-41985483 Medicago truncatula
Medtr7g103680 2.0kb upstream 2.0kb upstream 11467 true chr7: 41973017-41984483 Medicago truncatula
Medtr7g103680 2.0kb upstream 2.0kb upstream 2000 false chr7: 41973017-41975016 Medicago truncatula
Medtr7g103680 2.0kb downstream 2.0kb downstream 11467 true chr7: 41975017-41986483 Medicago truncatula
Medtr7g103680 2.0kb downstream 2.0kb downstream 2000 false chr7: 41984484-41986483 Medicago truncatula
Medtr7g103680 5.0kb upstream 5.0kb upstream 14467 true chr7: 41970017-41984483 Medicago truncatula
Medtr7g103680 5.0kb upstream 5.0kb upstream 5000 false chr7: 41970017-41975016 Medicago truncatula
Medtr7g103680 5.0kb downstream 5.0kb downstream 14467 true chr7: 41975017-41989483 Medicago truncatula
Medtr7g103680 5.0kb downstream 5.0kb downstream 5000 false chr7: 41984484-41989483 Medicago truncatula
Medtr7g103680 10.0kb upstream 10.0kb upstream 19467 true chr7: 41965017-41984483 Medicago truncatula
Medtr7g103680 10.0kb upstream 10.0kb upstream 10000 false chr7: 41965017-41975016 Medicago truncatula
Medtr7g103680 10.0kb downstream 10.0kb downstream 19467 true chr7: 41975017-41994483 Medicago truncatula
Medtr7g103680 10.0kb downstream 10.0kb downstream 10000 false chr7: 41984484-41994483 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312789 5265 Fabidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.692     High  
cufflinks 12.981     High  
cufflinks 11.901     High  
cufflinks 2.748       Low
cufflinks 15.808     High High
cufflinks 2.591       Low
cufflinks 4.67        
cufflinks 10.371     High  
cufflinks 3.862        

0 Strain