Gene : Medtr7g103840 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG2071 - mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11 Description:  ENTH/VHS-like protein
Genomic Order:  5182 Name:  ? Medtr7g103840
Secondary Identifier:  ? PAC:31077031
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g103840 0.5kb upstream 0.5kb upstream 7602 true chr7: 41990661-41998262 Medicago truncatula
Medtr7g103840 0.5kb upstream 0.5kb upstream 500 false chr7: 41990661-41991160 Medicago truncatula
Medtr7g103840 0.5kb downstream 0.5kb downstream 7602 true chr7: 41991161-41998762 Medicago truncatula
Medtr7g103840 0.5kb downstream 0.5kb downstream 500 false chr7: 41998263-41998762 Medicago truncatula
Medtr7g103840 1.0kb upstream 1.0kb upstream 8102 true chr7: 41990161-41998262 Medicago truncatula
Medtr7g103840 1.0kb upstream 1.0kb upstream 1000 false chr7: 41990161-41991160 Medicago truncatula
Medtr7g103840 1.0kb downstream 1.0kb downstream 8102 true chr7: 41991161-41999262 Medicago truncatula
Medtr7g103840 1.0kb downstream 1.0kb downstream 1000 false chr7: 41998263-41999262 Medicago truncatula
Medtr7g103840 2.0kb upstream 2.0kb upstream 9102 true chr7: 41989161-41998262 Medicago truncatula
Medtr7g103840 2.0kb upstream 2.0kb upstream 2000 false chr7: 41989161-41991160 Medicago truncatula
Medtr7g103840 2.0kb downstream 2.0kb downstream 9102 true chr7: 41991161-42000262 Medicago truncatula
Medtr7g103840 2.0kb downstream 2.0kb downstream 2000 false chr7: 41998263-42000262 Medicago truncatula
Medtr7g103840 5.0kb upstream 5.0kb upstream 12102 true chr7: 41986161-41998262 Medicago truncatula
Medtr7g103840 5.0kb upstream 5.0kb upstream 5000 false chr7: 41986161-41991160 Medicago truncatula
Medtr7g103840 5.0kb downstream 5.0kb downstream 12102 true chr7: 41991161-42003262 Medicago truncatula
Medtr7g103840 5.0kb downstream 5.0kb downstream 5000 false chr7: 41998263-42003262 Medicago truncatula
Medtr7g103840 10.0kb upstream 10.0kb upstream 17102 true chr7: 41981161-41998262 Medicago truncatula
Medtr7g103840 10.0kb upstream 10.0kb upstream 10000 false chr7: 41981161-41991160 Medicago truncatula
Medtr7g103840 10.0kb downstream 10.0kb downstream 17102 true chr7: 41991161-42008262 Medicago truncatula
Medtr7g103840 10.0kb downstream 10.0kb downstream 10000 false chr7: 41998263-42008262 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300860 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.818        
cufflinks 3.101        
cufflinks 4.093       High
cufflinks 1.261       Low
cufflinks 3.609        
cufflinks 0.826       Low
cufflinks 2.413        
cufflinks 3.347        
cufflinks 2.104        

0 Strain