Gene : Medtr7g104430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Description:  integral membrane Yip1-family protein
Genomic Order:  5223 Name:  ? Medtr7g104430
Secondary Identifier:  ? PAC:31078474
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g104430 0.5kb upstream 0.5kb upstream 1652 true chr7: 42313513-42315164 Medicago truncatula
Medtr7g104430 0.5kb upstream 0.5kb upstream 500 false chr7: 42313513-42314012 Medicago truncatula
Medtr7g104430 0.5kb downstream 0.5kb downstream 1652 true chr7: 42314013-42315664 Medicago truncatula
Medtr7g104430 0.5kb downstream 0.5kb downstream 500 false chr7: 42315165-42315664 Medicago truncatula
Medtr7g104430 1.0kb upstream 1.0kb upstream 2152 true chr7: 42313013-42315164 Medicago truncatula
Medtr7g104430 1.0kb upstream 1.0kb upstream 1000 false chr7: 42313013-42314012 Medicago truncatula
Medtr7g104430 1.0kb downstream 1.0kb downstream 2152 true chr7: 42314013-42316164 Medicago truncatula
Medtr7g104430 1.0kb downstream 1.0kb downstream 1000 false chr7: 42315165-42316164 Medicago truncatula
Medtr7g104430 2.0kb upstream 2.0kb upstream 3152 true chr7: 42312013-42315164 Medicago truncatula
Medtr7g104430 2.0kb upstream 2.0kb upstream 2000 false chr7: 42312013-42314012 Medicago truncatula
Medtr7g104430 2.0kb downstream 2.0kb downstream 3152 true chr7: 42314013-42317164 Medicago truncatula
Medtr7g104430 2.0kb downstream 2.0kb downstream 2000 false chr7: 42315165-42317164 Medicago truncatula
Medtr7g104430 5.0kb upstream 5.0kb upstream 6152 true chr7: 42309013-42315164 Medicago truncatula
Medtr7g104430 5.0kb upstream 5.0kb upstream 5000 false chr7: 42309013-42314012 Medicago truncatula
Medtr7g104430 5.0kb downstream 5.0kb downstream 6152 true chr7: 42314013-42320164 Medicago truncatula
Medtr7g104430 5.0kb downstream 5.0kb downstream 5000 false chr7: 42315165-42320164 Medicago truncatula
Medtr7g104430 10.0kb upstream 10.0kb upstream 11152 true chr7: 42304013-42315164 Medicago truncatula
Medtr7g104430 10.0kb upstream 10.0kb upstream 10000 false chr7: 42304013-42314012 Medicago truncatula
Medtr7g104430 10.0kb downstream 10.0kb downstream 11152 true chr7: 42314013-42325164 Medicago truncatula
Medtr7g104430 10.0kb downstream 10.0kb downstream 10000 false chr7: 42315165-42325164 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308811 5265 Fabidae View MSA
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.96     High  
cufflinks 11.4     High  
cufflinks 10.373     High  
cufflinks 35.484     High High
cufflinks 11.642     High  
cufflinks 34.391     High High
cufflinks 11.866     High  
cufflinks 8.782       Low
cufflinks 26.572     High  

0 Strain