Gene : Medtr7g104200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10795:SF397 - CUCUMISIN-LIKE PROTEIN Description:  subtilisin-like serine protease
Genomic Order:  5205 Name:  ? Medtr7g104200
Secondary Identifier:  ? PAC:31083297
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g104200 0.5kb upstream 0.5kb upstream 4467 true chr7: 42214500-42218966 Medicago truncatula
Medtr7g104200 0.5kb upstream 0.5kb upstream 500 false chr7: 42218467-42218966 Medicago truncatula
Medtr7g104200 0.5kb downstream 0.5kb downstream 4467 true chr7: 42214000-42218466 Medicago truncatula
Medtr7g104200 0.5kb downstream 0.5kb downstream 500 false chr7: 42214000-42214499 Medicago truncatula
Medtr7g104200 1.0kb upstream 1.0kb upstream 4967 true chr7: 42214500-42219466 Medicago truncatula
Medtr7g104200 1.0kb upstream 1.0kb upstream 1000 false chr7: 42218467-42219466 Medicago truncatula
Medtr7g104200 1.0kb downstream 1.0kb downstream 4967 true chr7: 42213500-42218466 Medicago truncatula
Medtr7g104200 1.0kb downstream 1.0kb downstream 1000 false chr7: 42213500-42214499 Medicago truncatula
Medtr7g104200 2.0kb upstream 2.0kb upstream 5967 true chr7: 42214500-42220466 Medicago truncatula
Medtr7g104200 2.0kb upstream 2.0kb upstream 2000 false chr7: 42218467-42220466 Medicago truncatula
Medtr7g104200 2.0kb downstream 2.0kb downstream 5967 true chr7: 42212500-42218466 Medicago truncatula
Medtr7g104200 2.0kb downstream 2.0kb downstream 2000 false chr7: 42212500-42214499 Medicago truncatula
Medtr7g104200 5.0kb upstream 5.0kb upstream 8967 true chr7: 42214500-42223466 Medicago truncatula
Medtr7g104200 5.0kb upstream 5.0kb upstream 5000 false chr7: 42218467-42223466 Medicago truncatula
Medtr7g104200 5.0kb downstream 5.0kb downstream 8967 true chr7: 42209500-42218466 Medicago truncatula
Medtr7g104200 5.0kb downstream 5.0kb downstream 5000 false chr7: 42209500-42214499 Medicago truncatula
Medtr7g104200 10.0kb upstream 10.0kb upstream 13967 true chr7: 42214500-42228466 Medicago truncatula
Medtr7g104200 10.0kb upstream 10.0kb upstream 10000 false chr7: 42218467-42228466 Medicago truncatula
Medtr7g104200 10.0kb downstream 10.0kb downstream 13967 true chr7: 42204500-42218466 Medicago truncatula
Medtr7g104200 10.0kb downstream 10.0kb downstream 10000 false chr7: 42204500-42214499 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302650 5265 Fabidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.034     Low  
cufflinks 0.023     Low Low
cufflinks 0.041     Low  
cufflinks 0.075        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.026     Low Low
cufflinks 0.148       High

0 Strain