Gene : Medtr7g104940 M. truncatula Mt4.0v1
Defline:  (1 of 142) PF02519 - Auxin responsive protein (Auxin_inducible) Description:  SAUR-like auxin-responsive family protein
Genomic Order:  5260 Name:  ? Medtr7g104940
Secondary Identifier:  ? PAC:31083791
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g104940 0.5kb upstream 0.5kb upstream 953 true chr7: 42546947-42547899 Medicago truncatula
Medtr7g104940 0.5kb upstream 0.5kb upstream 500 false chr7: 42546947-42547446 Medicago truncatula
Medtr7g104940 0.5kb downstream 0.5kb downstream 953 true chr7: 42547447-42548399 Medicago truncatula
Medtr7g104940 0.5kb downstream 0.5kb downstream 500 false chr7: 42547900-42548399 Medicago truncatula
Medtr7g104940 1.0kb upstream 1.0kb upstream 1453 true chr7: 42546447-42547899 Medicago truncatula
Medtr7g104940 1.0kb upstream 1.0kb upstream 1000 false chr7: 42546447-42547446 Medicago truncatula
Medtr7g104940 1.0kb downstream 1.0kb downstream 1453 true chr7: 42547447-42548899 Medicago truncatula
Medtr7g104940 1.0kb downstream 1.0kb downstream 1000 false chr7: 42547900-42548899 Medicago truncatula
Medtr7g104940 2.0kb upstream 2.0kb upstream 2453 true chr7: 42545447-42547899 Medicago truncatula
Medtr7g104940 2.0kb upstream 2.0kb upstream 2000 false chr7: 42545447-42547446 Medicago truncatula
Medtr7g104940 2.0kb downstream 2.0kb downstream 2453 true chr7: 42547447-42549899 Medicago truncatula
Medtr7g104940 2.0kb downstream 2.0kb downstream 2000 false chr7: 42547900-42549899 Medicago truncatula
Medtr7g104940 5.0kb upstream 5.0kb upstream 5453 true chr7: 42542447-42547899 Medicago truncatula
Medtr7g104940 5.0kb upstream 5.0kb upstream 5000 false chr7: 42542447-42547446 Medicago truncatula
Medtr7g104940 5.0kb downstream 5.0kb downstream 5453 true chr7: 42547447-42552899 Medicago truncatula
Medtr7g104940 5.0kb downstream 5.0kb downstream 5000 false chr7: 42547900-42552899 Medicago truncatula
Medtr7g104940 10.0kb upstream 10.0kb upstream 10453 true chr7: 42537447-42547899 Medicago truncatula
Medtr7g104940 10.0kb upstream 10.0kb upstream 10000 false chr7: 42537447-42547446 Medicago truncatula
Medtr7g104940 10.0kb downstream 10.0kb downstream 10453 true chr7: 42547447-42557899 Medicago truncatula
Medtr7g104940 10.0kb downstream 10.0kb downstream 10000 false chr7: 42547900-42557899 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298890 5265 Fabidae View MSA
124068119 5270 Rosid View MSA
123749819 5271 Pentapetalae View MSA
122788630 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  

0 Strain