Gene : Medtr7g105080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF01020 - Ribosomal L40e family (Ribosomal_L40e) Description:  ubiquitin-60S ribosomal L40 fusion protein
Genomic Order:  5268 Name:  ? Medtr7g105080
Secondary Identifier:  ? PAC:31084313
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g105080 0.5kb upstream 0.5kb upstream 2084 true chr7: 42608272-42610355 Medicago truncatula
Medtr7g105080 0.5kb upstream 0.5kb upstream 500 false chr7: 42609856-42610355 Medicago truncatula
Medtr7g105080 0.5kb downstream 0.5kb downstream 2084 true chr7: 42607772-42609855 Medicago truncatula
Medtr7g105080 0.5kb downstream 0.5kb downstream 500 false chr7: 42607772-42608271 Medicago truncatula
Medtr7g105080 1.0kb upstream 1.0kb upstream 2584 true chr7: 42608272-42610855 Medicago truncatula
Medtr7g105080 1.0kb upstream 1.0kb upstream 1000 false chr7: 42609856-42610855 Medicago truncatula
Medtr7g105080 1.0kb downstream 1.0kb downstream 2584 true chr7: 42607272-42609855 Medicago truncatula
Medtr7g105080 1.0kb downstream 1.0kb downstream 1000 false chr7: 42607272-42608271 Medicago truncatula
Medtr7g105080 2.0kb upstream 2.0kb upstream 3584 true chr7: 42608272-42611855 Medicago truncatula
Medtr7g105080 2.0kb upstream 2.0kb upstream 2000 false chr7: 42609856-42611855 Medicago truncatula
Medtr7g105080 2.0kb downstream 2.0kb downstream 3584 true chr7: 42606272-42609855 Medicago truncatula
Medtr7g105080 2.0kb downstream 2.0kb downstream 2000 false chr7: 42606272-42608271 Medicago truncatula
Medtr7g105080 5.0kb upstream 5.0kb upstream 6584 true chr7: 42608272-42614855 Medicago truncatula
Medtr7g105080 5.0kb upstream 5.0kb upstream 5000 false chr7: 42609856-42614855 Medicago truncatula
Medtr7g105080 5.0kb downstream 5.0kb downstream 6584 true chr7: 42603272-42609855 Medicago truncatula
Medtr7g105080 5.0kb downstream 5.0kb downstream 5000 false chr7: 42603272-42608271 Medicago truncatula
Medtr7g105080 10.0kb upstream 10.0kb upstream 11584 true chr7: 42608272-42619855 Medicago truncatula
Medtr7g105080 10.0kb upstream 10.0kb upstream 10000 false chr7: 42609856-42619855 Medicago truncatula
Medtr7g105080 10.0kb downstream 10.0kb downstream 11584 true chr7: 42598272-42609855 Medicago truncatula
Medtr7g105080 10.0kb downstream 10.0kb downstream 10000 false chr7: 42598272-42608271 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314502 5265 Fabidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.122     High  
cufflinks 57.653     High  
cufflinks 44.755     High Low
cufflinks 210.589     High High
cufflinks 93.044     High  
cufflinks 96.976     High  
cufflinks 99.88     High  
cufflinks 65.955     High  
cufflinks 154.237     High High

0 Strain