Gene : Medtr7g104700 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  5243 Name:  ? Medtr7g104700
Secondary Identifier:  ? PAC:31082370
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g104700 0.5kb upstream 0.5kb upstream 4813 true chr7: 42439751-42444563 Medicago truncatula
Medtr7g104700 0.5kb upstream 0.5kb upstream 500 false chr7: 42439751-42440250 Medicago truncatula
Medtr7g104700 0.5kb downstream 0.5kb downstream 4813 true chr7: 42440251-42445063 Medicago truncatula
Medtr7g104700 0.5kb downstream 0.5kb downstream 500 false chr7: 42444564-42445063 Medicago truncatula
Medtr7g104700 1.0kb upstream 1.0kb upstream 5313 true chr7: 42439251-42444563 Medicago truncatula
Medtr7g104700 1.0kb upstream 1.0kb upstream 1000 false chr7: 42439251-42440250 Medicago truncatula
Medtr7g104700 1.0kb downstream 1.0kb downstream 5313 true chr7: 42440251-42445563 Medicago truncatula
Medtr7g104700 1.0kb downstream 1.0kb downstream 1000 false chr7: 42444564-42445563 Medicago truncatula
Medtr7g104700 2.0kb upstream 2.0kb upstream 6313 true chr7: 42438251-42444563 Medicago truncatula
Medtr7g104700 2.0kb upstream 2.0kb upstream 2000 false chr7: 42438251-42440250 Medicago truncatula
Medtr7g104700 2.0kb downstream 2.0kb downstream 6313 true chr7: 42440251-42446563 Medicago truncatula
Medtr7g104700 2.0kb downstream 2.0kb downstream 2000 false chr7: 42444564-42446563 Medicago truncatula
Medtr7g104700 5.0kb upstream 5.0kb upstream 9313 true chr7: 42435251-42444563 Medicago truncatula
Medtr7g104700 5.0kb upstream 5.0kb upstream 5000 false chr7: 42435251-42440250 Medicago truncatula
Medtr7g104700 5.0kb downstream 5.0kb downstream 9313 true chr7: 42440251-42449563 Medicago truncatula
Medtr7g104700 5.0kb downstream 5.0kb downstream 5000 false chr7: 42444564-42449563 Medicago truncatula
Medtr7g104700 10.0kb upstream 10.0kb upstream 14313 true chr7: 42430251-42444563 Medicago truncatula
Medtr7g104700 10.0kb upstream 10.0kb upstream 10000 false chr7: 42430251-42440250 Medicago truncatula
Medtr7g104700 10.0kb downstream 10.0kb downstream 14313 true chr7: 42440251-42454563 Medicago truncatula
Medtr7g104700 10.0kb downstream 10.0kb downstream 10000 false chr7: 42444564-42454563 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299509 5265 Fabidae View MSA
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.815        
cufflinks 2.338        
cufflinks 1.907        
cufflinks 0.912        
cufflinks 2.847       High
cufflinks 0.326       Low
cufflinks 1.233        
cufflinks 1.926        
cufflinks 1.489        

0 Strain