Gene : Medtr7g105810 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12300//PTHR12300:SF44 - HVA22-LIKE PROTEINS Description:  TB2/DP1, HVA22 family protein
Genomic Order:  5318 Name:  ? Medtr7g105810
Secondary Identifier:  ? PAC:31078943
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g105810 0.5kb upstream 0.5kb upstream 2489 true chr7: 42959093-42961581 Medicago truncatula
Medtr7g105810 0.5kb upstream 0.5kb upstream 500 false chr7: 42959093-42959592 Medicago truncatula
Medtr7g105810 0.5kb downstream 0.5kb downstream 2489 true chr7: 42959593-42962081 Medicago truncatula
Medtr7g105810 0.5kb downstream 0.5kb downstream 500 false chr7: 42961582-42962081 Medicago truncatula
Medtr7g105810 1.0kb upstream 1.0kb upstream 2989 true chr7: 42958593-42961581 Medicago truncatula
Medtr7g105810 1.0kb upstream 1.0kb upstream 1000 false chr7: 42958593-42959592 Medicago truncatula
Medtr7g105810 1.0kb downstream 1.0kb downstream 2989 true chr7: 42959593-42962581 Medicago truncatula
Medtr7g105810 1.0kb downstream 1.0kb downstream 1000 false chr7: 42961582-42962581 Medicago truncatula
Medtr7g105810 2.0kb upstream 2.0kb upstream 3989 true chr7: 42957593-42961581 Medicago truncatula
Medtr7g105810 2.0kb upstream 2.0kb upstream 2000 false chr7: 42957593-42959592 Medicago truncatula
Medtr7g105810 2.0kb downstream 2.0kb downstream 3989 true chr7: 42959593-42963581 Medicago truncatula
Medtr7g105810 2.0kb downstream 2.0kb downstream 2000 false chr7: 42961582-42963581 Medicago truncatula
Medtr7g105810 5.0kb upstream 5.0kb upstream 6989 true chr7: 42954593-42961581 Medicago truncatula
Medtr7g105810 5.0kb upstream 5.0kb upstream 5000 false chr7: 42954593-42959592 Medicago truncatula
Medtr7g105810 5.0kb downstream 5.0kb downstream 6989 true chr7: 42959593-42966581 Medicago truncatula
Medtr7g105810 5.0kb downstream 5.0kb downstream 5000 false chr7: 42961582-42966581 Medicago truncatula
Medtr7g105810 10.0kb upstream 10.0kb upstream 11989 true chr7: 42949593-42961581 Medicago truncatula
Medtr7g105810 10.0kb upstream 10.0kb upstream 10000 false chr7: 42949593-42959592 Medicago truncatula
Medtr7g105810 10.0kb downstream 10.0kb downstream 11989 true chr7: 42959593-42971581 Medicago truncatula
Medtr7g105810 10.0kb downstream 10.0kb downstream 10000 false chr7: 42961582-42971581 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314306 5265 Fabidae View MSA
124074738 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.947        
cufflinks 0.377       Low
cufflinks 0.619        
cufflinks 3.233        
cufflinks 0.288       Low
cufflinks 6.205        
cufflinks 16.696     High High
cufflinks 0.45        
cufflinks 9.127        

0 Strain