Gene : Medtr7g105790 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR33057:SF17 - GB Description:  ovate transcriptional repressor
Genomic Order:  5316 Name:  ? Medtr7g105790
Secondary Identifier:  ? PAC:31083195
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g105790 0.5kb upstream 0.5kb upstream 1695 true chr7: 42945242-42946936 Medicago truncatula
Medtr7g105790 0.5kb upstream 0.5kb upstream 500 false chr7: 42946437-42946936 Medicago truncatula
Medtr7g105790 0.5kb downstream 0.5kb downstream 1695 true chr7: 42944742-42946436 Medicago truncatula
Medtr7g105790 0.5kb downstream 0.5kb downstream 500 false chr7: 42944742-42945241 Medicago truncatula
Medtr7g105790 1.0kb upstream 1.0kb upstream 2195 true chr7: 42945242-42947436 Medicago truncatula
Medtr7g105790 1.0kb upstream 1.0kb upstream 1000 false chr7: 42946437-42947436 Medicago truncatula
Medtr7g105790 1.0kb downstream 1.0kb downstream 2195 true chr7: 42944242-42946436 Medicago truncatula
Medtr7g105790 1.0kb downstream 1.0kb downstream 1000 false chr7: 42944242-42945241 Medicago truncatula
Medtr7g105790 2.0kb upstream 2.0kb upstream 3195 true chr7: 42945242-42948436 Medicago truncatula
Medtr7g105790 2.0kb upstream 2.0kb upstream 2000 false chr7: 42946437-42948436 Medicago truncatula
Medtr7g105790 2.0kb downstream 2.0kb downstream 3195 true chr7: 42943242-42946436 Medicago truncatula
Medtr7g105790 2.0kb downstream 2.0kb downstream 2000 false chr7: 42943242-42945241 Medicago truncatula
Medtr7g105790 5.0kb upstream 5.0kb upstream 6195 true chr7: 42945242-42951436 Medicago truncatula
Medtr7g105790 5.0kb upstream 5.0kb upstream 5000 false chr7: 42946437-42951436 Medicago truncatula
Medtr7g105790 5.0kb downstream 5.0kb downstream 6195 true chr7: 42940242-42946436 Medicago truncatula
Medtr7g105790 5.0kb downstream 5.0kb downstream 5000 false chr7: 42940242-42945241 Medicago truncatula
Medtr7g105790 10.0kb upstream 10.0kb upstream 11195 true chr7: 42945242-42956436 Medicago truncatula
Medtr7g105790 10.0kb upstream 10.0kb upstream 10000 false chr7: 42946437-42956436 Medicago truncatula
Medtr7g105790 10.0kb downstream 10.0kb downstream 11195 true chr7: 42935242-42946436 Medicago truncatula
Medtr7g105790 10.0kb downstream 10.0kb downstream 10000 false chr7: 42935242-42945241 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.092       Low
cufflinks 1.043        
cufflinks 1.034        
cufflinks 0.935        
cufflinks 1.61       High
cufflinks 0.358        
cufflinks 0.658        
cufflinks 1.039        
cufflinks 0.571        

0 Strain