Gene : Medtr7g106510 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11945:SF174 - PROTEIN AGAMOUS-LIKE 48-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  5365 Name:  ? Medtr7g106510
Secondary Identifier:  ? PAC:31079821
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g106510 0.5kb upstream 0.5kb upstream 2012 true chr7: 43360577-43362588 Medicago truncatula
Medtr7g106510 0.5kb upstream 0.5kb upstream 500 false chr7: 43360577-43361076 Medicago truncatula
Medtr7g106510 0.5kb downstream 0.5kb downstream 2012 true chr7: 43361077-43363088 Medicago truncatula
Medtr7g106510 0.5kb downstream 0.5kb downstream 500 false chr7: 43362589-43363088 Medicago truncatula
Medtr7g106510 1.0kb upstream 1.0kb upstream 2512 true chr7: 43360077-43362588 Medicago truncatula
Medtr7g106510 1.0kb upstream 1.0kb upstream 1000 false chr7: 43360077-43361076 Medicago truncatula
Medtr7g106510 1.0kb downstream 1.0kb downstream 2512 true chr7: 43361077-43363588 Medicago truncatula
Medtr7g106510 1.0kb downstream 1.0kb downstream 1000 false chr7: 43362589-43363588 Medicago truncatula
Medtr7g106510 2.0kb upstream 2.0kb upstream 3512 true chr7: 43359077-43362588 Medicago truncatula
Medtr7g106510 2.0kb upstream 2.0kb upstream 2000 false chr7: 43359077-43361076 Medicago truncatula
Medtr7g106510 2.0kb downstream 2.0kb downstream 3512 true chr7: 43361077-43364588 Medicago truncatula
Medtr7g106510 2.0kb downstream 2.0kb downstream 2000 false chr7: 43362589-43364588 Medicago truncatula
Medtr7g106510 5.0kb upstream 5.0kb upstream 6512 true chr7: 43356077-43362588 Medicago truncatula
Medtr7g106510 5.0kb upstream 5.0kb upstream 5000 false chr7: 43356077-43361076 Medicago truncatula
Medtr7g106510 5.0kb downstream 5.0kb downstream 6512 true chr7: 43361077-43367588 Medicago truncatula
Medtr7g106510 5.0kb downstream 5.0kb downstream 5000 false chr7: 43362589-43367588 Medicago truncatula
Medtr7g106510 10.0kb upstream 10.0kb upstream 11512 true chr7: 43351077-43362588 Medicago truncatula
Medtr7g106510 10.0kb upstream 10.0kb upstream 10000 false chr7: 43351077-43361076 Medicago truncatula
Medtr7g106510 10.0kb downstream 10.0kb downstream 11512 true chr7: 43361077-43372588 Medicago truncatula
Medtr7g106510 10.0kb downstream 10.0kb downstream 10000 false chr7: 43362589-43372588 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312072 5265 Fabidae View MSA
124072156 5270 Rosid View MSA
123628095 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain