Gene : Medtr7g106100 M. truncatula Mt4.0v1
Defline:  (1 of 72) PF03168 - Late embryogenesis abundant protein (LEA_2) Description:  late embryogenesis abundant protein
Genomic Order:  5338 Name:  ? Medtr7g106100
Secondary Identifier:  ? PAC:31077797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g106100 0.5kb upstream 0.5kb upstream 1268 true chr7: 43099253-43100520 Medicago truncatula
Medtr7g106100 0.5kb upstream 0.5kb upstream 500 false chr7: 43100021-43100520 Medicago truncatula
Medtr7g106100 0.5kb downstream 0.5kb downstream 1268 true chr7: 43098753-43100020 Medicago truncatula
Medtr7g106100 0.5kb downstream 0.5kb downstream 500 false chr7: 43098753-43099252 Medicago truncatula
Medtr7g106100 1.0kb upstream 1.0kb upstream 1768 true chr7: 43099253-43101020 Medicago truncatula
Medtr7g106100 1.0kb upstream 1.0kb upstream 1000 false chr7: 43100021-43101020 Medicago truncatula
Medtr7g106100 1.0kb downstream 1.0kb downstream 1768 true chr7: 43098253-43100020 Medicago truncatula
Medtr7g106100 1.0kb downstream 1.0kb downstream 1000 false chr7: 43098253-43099252 Medicago truncatula
Medtr7g106100 2.0kb upstream 2.0kb upstream 2768 true chr7: 43099253-43102020 Medicago truncatula
Medtr7g106100 2.0kb upstream 2.0kb upstream 2000 false chr7: 43100021-43102020 Medicago truncatula
Medtr7g106100 2.0kb downstream 2.0kb downstream 2768 true chr7: 43097253-43100020 Medicago truncatula
Medtr7g106100 2.0kb downstream 2.0kb downstream 2000 false chr7: 43097253-43099252 Medicago truncatula
Medtr7g106100 5.0kb upstream 5.0kb upstream 5768 true chr7: 43099253-43105020 Medicago truncatula
Medtr7g106100 5.0kb upstream 5.0kb upstream 5000 false chr7: 43100021-43105020 Medicago truncatula
Medtr7g106100 5.0kb downstream 5.0kb downstream 5768 true chr7: 43094253-43100020 Medicago truncatula
Medtr7g106100 5.0kb downstream 5.0kb downstream 5000 false chr7: 43094253-43099252 Medicago truncatula
Medtr7g106100 10.0kb upstream 10.0kb upstream 10768 true chr7: 43099253-43110020 Medicago truncatula
Medtr7g106100 10.0kb upstream 10.0kb upstream 10000 false chr7: 43100021-43110020 Medicago truncatula
Medtr7g106100 10.0kb downstream 10.0kb downstream 10768 true chr7: 43089253-43100020 Medicago truncatula
Medtr7g106100 10.0kb downstream 10.0kb downstream 10000 false chr7: 43089253-43099252 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310802 5265 Fabidae View MSA
124037639 5270 Rosid View MSA
123610417 5271 Pentapetalae View MSA
122796739 5272 Eudicot View MSA
122045519 5273 Angiosperm View MSA
121310460 5274 Embryophyte View MSA
123347936 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134       High

0 Strain