Gene : Medtr7g107080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10627//PTHR10627:SF43 - SCP160 Description:  SAM domain protein
Genomic Order:  5405 Name:  ? Medtr7g107080
Secondary Identifier:  ? PAC:31079395
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g107080 0.5kb upstream 0.5kb upstream 2242 true chr7: 43659898-43662139 Medicago truncatula
Medtr7g107080 0.5kb upstream 0.5kb upstream 500 false chr7: 43659898-43660397 Medicago truncatula
Medtr7g107080 0.5kb downstream 0.5kb downstream 2242 true chr7: 43660398-43662639 Medicago truncatula
Medtr7g107080 0.5kb downstream 0.5kb downstream 500 false chr7: 43662140-43662639 Medicago truncatula
Medtr7g107080 1.0kb upstream 1.0kb upstream 2742 true chr7: 43659398-43662139 Medicago truncatula
Medtr7g107080 1.0kb upstream 1.0kb upstream 1000 false chr7: 43659398-43660397 Medicago truncatula
Medtr7g107080 1.0kb downstream 1.0kb downstream 2742 true chr7: 43660398-43663139 Medicago truncatula
Medtr7g107080 1.0kb downstream 1.0kb downstream 1000 false chr7: 43662140-43663139 Medicago truncatula
Medtr7g107080 2.0kb upstream 2.0kb upstream 3742 true chr7: 43658398-43662139 Medicago truncatula
Medtr7g107080 2.0kb upstream 2.0kb upstream 2000 false chr7: 43658398-43660397 Medicago truncatula
Medtr7g107080 2.0kb downstream 2.0kb downstream 3742 true chr7: 43660398-43664139 Medicago truncatula
Medtr7g107080 2.0kb downstream 2.0kb downstream 2000 false chr7: 43662140-43664139 Medicago truncatula
Medtr7g107080 5.0kb upstream 5.0kb upstream 6742 true chr7: 43655398-43662139 Medicago truncatula
Medtr7g107080 5.0kb upstream 5.0kb upstream 5000 false chr7: 43655398-43660397 Medicago truncatula
Medtr7g107080 5.0kb downstream 5.0kb downstream 6742 true chr7: 43660398-43667139 Medicago truncatula
Medtr7g107080 5.0kb downstream 5.0kb downstream 5000 false chr7: 43662140-43667139 Medicago truncatula
Medtr7g107080 10.0kb upstream 10.0kb upstream 11742 true chr7: 43650398-43662139 Medicago truncatula
Medtr7g107080 10.0kb upstream 10.0kb upstream 10000 false chr7: 43650398-43660397 Medicago truncatula
Medtr7g107080 10.0kb downstream 10.0kb downstream 11742 true chr7: 43660398-43672139 Medicago truncatula
Medtr7g107080 10.0kb downstream 10.0kb downstream 10000 false chr7: 43662140-43672139 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305870 5265 Fabidae View MSA
124070346 5270 Rosid View MSA
123742337 5271 Pentapetalae View MSA
122794270 5272 Eudicot View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.752        
cufflinks 5.352        
cufflinks 5.775        
cufflinks 9.033     High High
cufflinks 6.266        
cufflinks 3.202       Low
cufflinks 6.658        
cufflinks 5.227        
cufflinks 8.379       High

0 Strain