Gene : Medtr7g106780 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11880:SF8 - 37S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL Description:  ribosomal protein S19
Genomic Order:  5386 Name:  ? Medtr7g106780
Secondary Identifier:  ? PAC:31079477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g106780 0.5kb upstream 0.5kb upstream 1437 true chr7: 43489213-43490649 Medicago truncatula
Medtr7g106780 0.5kb upstream 0.5kb upstream 500 false chr7: 43489213-43489712 Medicago truncatula
Medtr7g106780 0.5kb downstream 0.5kb downstream 1437 true chr7: 43489713-43491149 Medicago truncatula
Medtr7g106780 0.5kb downstream 0.5kb downstream 500 false chr7: 43490650-43491149 Medicago truncatula
Medtr7g106780 1.0kb upstream 1.0kb upstream 1937 true chr7: 43488713-43490649 Medicago truncatula
Medtr7g106780 1.0kb upstream 1.0kb upstream 1000 false chr7: 43488713-43489712 Medicago truncatula
Medtr7g106780 1.0kb downstream 1.0kb downstream 1937 true chr7: 43489713-43491649 Medicago truncatula
Medtr7g106780 1.0kb downstream 1.0kb downstream 1000 false chr7: 43490650-43491649 Medicago truncatula
Medtr7g106780 2.0kb upstream 2.0kb upstream 2937 true chr7: 43487713-43490649 Medicago truncatula
Medtr7g106780 2.0kb upstream 2.0kb upstream 2000 false chr7: 43487713-43489712 Medicago truncatula
Medtr7g106780 2.0kb downstream 2.0kb downstream 2937 true chr7: 43489713-43492649 Medicago truncatula
Medtr7g106780 2.0kb downstream 2.0kb downstream 2000 false chr7: 43490650-43492649 Medicago truncatula
Medtr7g106780 5.0kb upstream 5.0kb upstream 5937 true chr7: 43484713-43490649 Medicago truncatula
Medtr7g106780 5.0kb upstream 5.0kb upstream 5000 false chr7: 43484713-43489712 Medicago truncatula
Medtr7g106780 5.0kb downstream 5.0kb downstream 5937 true chr7: 43489713-43495649 Medicago truncatula
Medtr7g106780 5.0kb downstream 5.0kb downstream 5000 false chr7: 43490650-43495649 Medicago truncatula
Medtr7g106780 10.0kb upstream 10.0kb upstream 10937 true chr7: 43479713-43490649 Medicago truncatula
Medtr7g106780 10.0kb upstream 10.0kb upstream 10000 false chr7: 43479713-43489712 Medicago truncatula
Medtr7g106780 10.0kb downstream 10.0kb downstream 10937 true chr7: 43489713-43500649 Medicago truncatula
Medtr7g106780 10.0kb downstream 10.0kb downstream 10000 false chr7: 43490650-43500649 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122313516 5265 Fabidae View MSA
124071267 5270 Rosid View MSA
123749976 5271 Pentapetalae View MSA
122796059 5272 Eudicot View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.032     High  
cufflinks 15.839     High  
cufflinks 14.95     High  
cufflinks 8.209       Low
cufflinks 20.127     High High
cufflinks 6.995       Low
cufflinks 15.784     High  
cufflinks 16.029     High  
cufflinks 11.687     High  

0 Strain