Gene : Medtr7g107380 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3291 - Ribosomal protein S7 Description:  40S ribosomal protein S5-2
Genomic Order:  5429 Name:  ? Medtr7g107380
Secondary Identifier:  ? PAC:31081613
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g107380 0.5kb upstream 0.5kb upstream 5174 true chr7: 43807550-43812723 Medicago truncatula
Medtr7g107380 0.5kb upstream 0.5kb upstream 500 false chr7: 43807550-43808049 Medicago truncatula
Medtr7g107380 0.5kb downstream 0.5kb downstream 5174 true chr7: 43808050-43813223 Medicago truncatula
Medtr7g107380 0.5kb downstream 0.5kb downstream 500 false chr7: 43812724-43813223 Medicago truncatula
Medtr7g107380 1.0kb upstream 1.0kb upstream 5674 true chr7: 43807050-43812723 Medicago truncatula
Medtr7g107380 1.0kb upstream 1.0kb upstream 1000 false chr7: 43807050-43808049 Medicago truncatula
Medtr7g107380 1.0kb downstream 1.0kb downstream 5674 true chr7: 43808050-43813723 Medicago truncatula
Medtr7g107380 1.0kb downstream 1.0kb downstream 1000 false chr7: 43812724-43813723 Medicago truncatula
Medtr7g107380 2.0kb upstream 2.0kb upstream 6674 true chr7: 43806050-43812723 Medicago truncatula
Medtr7g107380 2.0kb upstream 2.0kb upstream 2000 false chr7: 43806050-43808049 Medicago truncatula
Medtr7g107380 2.0kb downstream 2.0kb downstream 6674 true chr7: 43808050-43814723 Medicago truncatula
Medtr7g107380 2.0kb downstream 2.0kb downstream 2000 false chr7: 43812724-43814723 Medicago truncatula
Medtr7g107380 5.0kb upstream 5.0kb upstream 9674 true chr7: 43803050-43812723 Medicago truncatula
Medtr7g107380 5.0kb upstream 5.0kb upstream 5000 false chr7: 43803050-43808049 Medicago truncatula
Medtr7g107380 5.0kb downstream 5.0kb downstream 9674 true chr7: 43808050-43817723 Medicago truncatula
Medtr7g107380 5.0kb downstream 5.0kb downstream 5000 false chr7: 43812724-43817723 Medicago truncatula
Medtr7g107380 10.0kb upstream 10.0kb upstream 14674 true chr7: 43798050-43812723 Medicago truncatula
Medtr7g107380 10.0kb upstream 10.0kb upstream 10000 false chr7: 43798050-43808049 Medicago truncatula
Medtr7g107380 10.0kb downstream 10.0kb downstream 14674 true chr7: 43808050-43822723 Medicago truncatula
Medtr7g107380 10.0kb downstream 10.0kb downstream 10000 false chr7: 43812724-43822723 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.946     High  
cufflinks 22.736     High  
cufflinks 20.623     High  
cufflinks 54.662     High High
cufflinks 37.093     High  
cufflinks 15.12     High Low
cufflinks 44.161     High  
cufflinks 28.799     High  
cufflinks 52.952     High High

0 Strain