Gene : Medtr7g107400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11489 - 40S RIBOSOMAL PROTEIN SA Description:  40S ribosomal SA-like protein
Genomic Order:  5431 Name:  ? Medtr7g107400
Secondary Identifier:  ? PAC:31078383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g107400 0.5kb upstream 0.5kb upstream 3308 true chr7: 43822415-43825722 Medicago truncatula
Medtr7g107400 0.5kb upstream 0.5kb upstream 500 false chr7: 43825223-43825722 Medicago truncatula
Medtr7g107400 0.5kb downstream 0.5kb downstream 3308 true chr7: 43821915-43825222 Medicago truncatula
Medtr7g107400 0.5kb downstream 0.5kb downstream 500 false chr7: 43821915-43822414 Medicago truncatula
Medtr7g107400 1.0kb upstream 1.0kb upstream 3808 true chr7: 43822415-43826222 Medicago truncatula
Medtr7g107400 1.0kb upstream 1.0kb upstream 1000 false chr7: 43825223-43826222 Medicago truncatula
Medtr7g107400 1.0kb downstream 1.0kb downstream 3808 true chr7: 43821415-43825222 Medicago truncatula
Medtr7g107400 1.0kb downstream 1.0kb downstream 1000 false chr7: 43821415-43822414 Medicago truncatula
Medtr7g107400 2.0kb upstream 2.0kb upstream 4808 true chr7: 43822415-43827222 Medicago truncatula
Medtr7g107400 2.0kb upstream 2.0kb upstream 2000 false chr7: 43825223-43827222 Medicago truncatula
Medtr7g107400 2.0kb downstream 2.0kb downstream 4808 true chr7: 43820415-43825222 Medicago truncatula
Medtr7g107400 2.0kb downstream 2.0kb downstream 2000 false chr7: 43820415-43822414 Medicago truncatula
Medtr7g107400 5.0kb upstream 5.0kb upstream 7808 true chr7: 43822415-43830222 Medicago truncatula
Medtr7g107400 5.0kb upstream 5.0kb upstream 5000 false chr7: 43825223-43830222 Medicago truncatula
Medtr7g107400 5.0kb downstream 5.0kb downstream 7808 true chr7: 43817415-43825222 Medicago truncatula
Medtr7g107400 5.0kb downstream 5.0kb downstream 5000 false chr7: 43817415-43822414 Medicago truncatula
Medtr7g107400 10.0kb upstream 10.0kb upstream 12808 true chr7: 43822415-43835222 Medicago truncatula
Medtr7g107400 10.0kb upstream 10.0kb upstream 10000 false chr7: 43825223-43835222 Medicago truncatula
Medtr7g107400 10.0kb downstream 10.0kb downstream 12808 true chr7: 43812415-43825222 Medicago truncatula
Medtr7g107400 10.0kb downstream 10.0kb downstream 10000 false chr7: 43812415-43822414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306925 5265 Fabidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.256     High Low
cufflinks 21.086     High  
cufflinks 17.676     High  
cufflinks 72.013     High High
cufflinks 34.219     High  
cufflinks 27.788     High  
cufflinks 25.125     High  
cufflinks 21.116     High  
cufflinks 58.362     High High

0 Strain