Gene : Medtr8g030550 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Description:  ATP-dependent helicase BRM
Genomic Order:  1490 Name:  ? Medtr8g030550
Secondary Identifier:  ? PAC:31076064
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g030550 0.5kb upstream 0.5kb upstream 12306   true chr8: 11267681-11279986 Medicago truncatula
Medtr8g030550 0.5kb upstream 0.5kb upstream 500   false chr8: 11279487-11279986 Medicago truncatula
Medtr8g030550 0.5kb downstream 0.5kb downstream 12306   true chr8: 11267181-11279486 Medicago truncatula
Medtr8g030550 0.5kb downstream 0.5kb downstream 500   false chr8: 11267181-11267680 Medicago truncatula
Medtr8g030550 1.0kb upstream 1.0kb upstream 12806   true chr8: 11267681-11280486 Medicago truncatula
Medtr8g030550 1.0kb upstream 1.0kb upstream 1000   false chr8: 11279487-11280486 Medicago truncatula
Medtr8g030550 1.0kb downstream 1.0kb downstream 12806   true chr8: 11266681-11279486 Medicago truncatula
Medtr8g030550 1.0kb downstream 1.0kb downstream 1000   false chr8: 11266681-11267680 Medicago truncatula
Medtr8g030550 2.0kb upstream 2.0kb upstream 13806   true chr8: 11267681-11281486 Medicago truncatula
Medtr8g030550 2.0kb upstream 2.0kb upstream 2000   false chr8: 11279487-11281486 Medicago truncatula
Medtr8g030550 2.0kb downstream 2.0kb downstream 13806   true chr8: 11265681-11279486 Medicago truncatula
Medtr8g030550 2.0kb downstream 2.0kb downstream 2000   false chr8: 11265681-11267680 Medicago truncatula
Medtr8g030550 5.0kb upstream 5.0kb upstream 16806   true chr8: 11267681-11284486 Medicago truncatula
Medtr8g030550 5.0kb upstream 5.0kb upstream 5000   false chr8: 11279487-11284486 Medicago truncatula
Medtr8g030550 5.0kb downstream 5.0kb downstream 16806   true chr8: 11262681-11279486 Medicago truncatula
Medtr8g030550 5.0kb downstream 5.0kb downstream 5000   false chr8: 11262681-11267680 Medicago truncatula
Medtr8g030550 10.0kb upstream 10.0kb upstream 21806   true chr8: 11267681-11289486 Medicago truncatula
Medtr8g030550 10.0kb upstream 10.0kb upstream 10000   false chr8: 11279487-11289486 Medicago truncatula
Medtr8g030550 10.0kb downstream 10.0kb downstream 21806   true chr8: 11257681-11279486 Medicago truncatula
Medtr8g030550 10.0kb downstream 10.0kb downstream 10000   false chr8: 11257681-11267680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304569 5265 Fabidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.774        
cufflinks 5.923        
cufflinks 7.207       High
cufflinks 1.136       Low
cufflinks 6.53        
cufflinks 1.413       Low
cufflinks 2.722        
cufflinks 5.591        
cufflinks 1.848        

0 Strain