Gene : Medtr8g028760 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR30566:SF5 - MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL Description:  mechanosensitive ion channel protein MscS
Genomic Order:  1465 Name:  ? Medtr8g028760
Secondary Identifier:  ? PAC:31076314
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028760 0.5kb upstream 0.5kb upstream 6324   true chr8: 11081197-11087520 Medicago truncatula
Medtr8g028760 0.5kb upstream 0.5kb upstream 500   false chr8: 11087021-11087520 Medicago truncatula
Medtr8g028760 0.5kb downstream 0.5kb downstream 6324   true chr8: 11080697-11087020 Medicago truncatula
Medtr8g028760 0.5kb downstream 0.5kb downstream 500   false chr8: 11080697-11081196 Medicago truncatula
Medtr8g028760 1.0kb upstream 1.0kb upstream 6824   true chr8: 11081197-11088020 Medicago truncatula
Medtr8g028760 1.0kb upstream 1.0kb upstream 1000   false chr8: 11087021-11088020 Medicago truncatula
Medtr8g028760 1.0kb downstream 1.0kb downstream 6824   true chr8: 11080197-11087020 Medicago truncatula
Medtr8g028760 1.0kb downstream 1.0kb downstream 1000   false chr8: 11080197-11081196 Medicago truncatula
Medtr8g028760 2.0kb upstream 2.0kb upstream 7824   true chr8: 11081197-11089020 Medicago truncatula
Medtr8g028760 2.0kb upstream 2.0kb upstream 2000   false chr8: 11087021-11089020 Medicago truncatula
Medtr8g028760 2.0kb downstream 2.0kb downstream 7824   true chr8: 11079197-11087020 Medicago truncatula
Medtr8g028760 2.0kb downstream 2.0kb downstream 2000   false chr8: 11079197-11081196 Medicago truncatula
Medtr8g028760 5.0kb upstream 5.0kb upstream 10824   true chr8: 11081197-11092020 Medicago truncatula
Medtr8g028760 5.0kb upstream 5.0kb upstream 5000   false chr8: 11087021-11092020 Medicago truncatula
Medtr8g028760 5.0kb downstream 5.0kb downstream 10824   true chr8: 11076197-11087020 Medicago truncatula
Medtr8g028760 5.0kb downstream 5.0kb downstream 5000   false chr8: 11076197-11081196 Medicago truncatula
Medtr8g028760 10.0kb upstream 10.0kb upstream 15824   true chr8: 11081197-11097020 Medicago truncatula
Medtr8g028760 10.0kb upstream 10.0kb upstream 10000   false chr8: 11087021-11097020 Medicago truncatula
Medtr8g028760 10.0kb downstream 10.0kb downstream 15824   true chr8: 11071197-11087020 Medicago truncatula
Medtr8g028760 10.0kb downstream 10.0kb downstream 10000   false chr8: 11071197-11081196 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306828 5265 Fabidae View MSA
124061670 5270 Rosid View MSA
123740011 5271 Pentapetalae View MSA
122793635 5272 Eudicot View MSA
122042686 5273 Angiosperm View MSA
121351031 5274 Embryophyte View MSA
123427972 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.933        
cufflinks 1.953        
cufflinks 2.212        
cufflinks 0.337       Low
cufflinks 3.548       High
cufflinks 0.137     Low Low
cufflinks 0.775        
cufflinks 1.804        
cufflinks 0.773        

0 Strain