Gene : Medtr8g030670 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR11165//PTHR11165:SF61 - SKP1 Description:  ubiquitin-protein ligase, putative
Genomic Order:  1501 Name:  ? Medtr8g030670
Secondary Identifier:  ? PAC:31071158
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g030670 0.5kb upstream 0.5kb upstream 4758   true chr8: 11365206-11369963 Medicago truncatula
Medtr8g030670 0.5kb upstream 0.5kb upstream 500   false chr8: 11365206-11365705 Medicago truncatula
Medtr8g030670 0.5kb downstream 0.5kb downstream 4758   true chr8: 11365706-11370463 Medicago truncatula
Medtr8g030670 0.5kb downstream 0.5kb downstream 500   false chr8: 11369964-11370463 Medicago truncatula
Medtr8g030670 1.0kb upstream 1.0kb upstream 5258   true chr8: 11364706-11369963 Medicago truncatula
Medtr8g030670 1.0kb upstream 1.0kb upstream 1000   false chr8: 11364706-11365705 Medicago truncatula
Medtr8g030670 1.0kb downstream 1.0kb downstream 5258   true chr8: 11365706-11370963 Medicago truncatula
Medtr8g030670 1.0kb downstream 1.0kb downstream 1000   false chr8: 11369964-11370963 Medicago truncatula
Medtr8g030670 2.0kb upstream 2.0kb upstream 6258   true chr8: 11363706-11369963 Medicago truncatula
Medtr8g030670 2.0kb upstream 2.0kb upstream 2000   false chr8: 11363706-11365705 Medicago truncatula
Medtr8g030670 2.0kb downstream 2.0kb downstream 6258   true chr8: 11365706-11371963 Medicago truncatula
Medtr8g030670 2.0kb downstream 2.0kb downstream 2000   false chr8: 11369964-11371963 Medicago truncatula
Medtr8g030670 5.0kb upstream 5.0kb upstream 9258   true chr8: 11360706-11369963 Medicago truncatula
Medtr8g030670 5.0kb upstream 5.0kb upstream 5000   false chr8: 11360706-11365705 Medicago truncatula
Medtr8g030670 5.0kb downstream 5.0kb downstream 9258   true chr8: 11365706-11374963 Medicago truncatula
Medtr8g030670 5.0kb downstream 5.0kb downstream 5000   false chr8: 11369964-11374963 Medicago truncatula
Medtr8g030670 10.0kb upstream 10.0kb upstream 14258   true chr8: 11355706-11369963 Medicago truncatula
Medtr8g030670 10.0kb upstream 10.0kb upstream 10000   false chr8: 11355706-11365705 Medicago truncatula
Medtr8g030670 10.0kb downstream 10.0kb downstream 14258   true chr8: 11365706-11379963 Medicago truncatula
Medtr8g030670 10.0kb downstream 10.0kb downstream 10000   false chr8: 11369964-11379963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.203        
cufflinks 3.908        
cufflinks 4.172        
cufflinks 1.277        
cufflinks 4.388        
cufflinks 0.707       Low
cufflinks 1.543        
cufflinks 3.959        
cufflinks 1.089       Low

0 Strain