Gene : Medtr8g031440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02137 - Adenosine-deaminase (editase) domain (A_deamin) Description:  tRNA-specific adenosine deaminase
Genomic Order:  1558 Name:  ? Medtr8g031440
Secondary Identifier:  ? PAC:31070222
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g031440 0.5kb upstream 0.5kb upstream 6571   true chr8: 11790399-11796969 Medicago truncatula
Medtr8g031440 0.5kb upstream 0.5kb upstream 500   false chr8: 11790399-11790898 Medicago truncatula
Medtr8g031440 0.5kb downstream 0.5kb downstream 6571   true chr8: 11790899-11797469 Medicago truncatula
Medtr8g031440 0.5kb downstream 0.5kb downstream 500   false chr8: 11796970-11797469 Medicago truncatula
Medtr8g031440 1.0kb upstream 1.0kb upstream 7071   true chr8: 11789899-11796969 Medicago truncatula
Medtr8g031440 1.0kb upstream 1.0kb upstream 1000   false chr8: 11789899-11790898 Medicago truncatula
Medtr8g031440 1.0kb downstream 1.0kb downstream 7071   true chr8: 11790899-11797969 Medicago truncatula
Medtr8g031440 1.0kb downstream 1.0kb downstream 1000   false chr8: 11796970-11797969 Medicago truncatula
Medtr8g031440 2.0kb upstream 2.0kb upstream 8071   true chr8: 11788899-11796969 Medicago truncatula
Medtr8g031440 2.0kb upstream 2.0kb upstream 2000   false chr8: 11788899-11790898 Medicago truncatula
Medtr8g031440 2.0kb downstream 2.0kb downstream 8071   true chr8: 11790899-11798969 Medicago truncatula
Medtr8g031440 2.0kb downstream 2.0kb downstream 2000   false chr8: 11796970-11798969 Medicago truncatula
Medtr8g031440 5.0kb upstream 5.0kb upstream 11071   true chr8: 11785899-11796969 Medicago truncatula
Medtr8g031440 5.0kb upstream 5.0kb upstream 5000   false chr8: 11785899-11790898 Medicago truncatula
Medtr8g031440 5.0kb downstream 5.0kb downstream 11071   true chr8: 11790899-11801969 Medicago truncatula
Medtr8g031440 5.0kb downstream 5.0kb downstream 5000   false chr8: 11796970-11801969 Medicago truncatula
Medtr8g031440 10.0kb upstream 10.0kb upstream 16071   true chr8: 11780899-11796969 Medicago truncatula
Medtr8g031440 10.0kb upstream 10.0kb upstream 10000   false chr8: 11780899-11790898 Medicago truncatula
Medtr8g031440 10.0kb downstream 10.0kb downstream 16071   true chr8: 11790899-11806969 Medicago truncatula
Medtr8g031440 10.0kb downstream 10.0kb downstream 10000   false chr8: 11796970-11806969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306991 5265 Fabidae View MSA
124068273 5270 Rosid View MSA
123741419 5271 Pentapetalae View MSA
122786096 5272 Eudicot View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136        
cufflinks 0.451        
cufflinks 0.473        
cufflinks 0.092       Low
cufflinks 0.627       High
cufflinks 0.224        
cufflinks 0.164        
cufflinks 0.393        
cufflinks 0.21        

0 Strain