Gene : Medtr8g032270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE Description:  dTDP-4-dehydrorhamnose dehydrogenase
Genomic Order:  1611 Name:  ? Medtr8g032270
Secondary Identifier:  ? PAC:31074890
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ETHYL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5041 Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  
Mtruncatula PWY-7528 Medicago truncatula pathologic  
Mtruncatula SAM-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g032270 0.5kb upstream 0.5kb upstream 3982   true chr8: 12129891-12133872 Medicago truncatula
Medtr8g032270 0.5kb upstream 0.5kb upstream 500   false chr8: 12133373-12133872 Medicago truncatula
Medtr8g032270 0.5kb downstream 0.5kb downstream 3982   true chr8: 12129391-12133372 Medicago truncatula
Medtr8g032270 0.5kb downstream 0.5kb downstream 500   false chr8: 12129391-12129890 Medicago truncatula
Medtr8g032270 1.0kb upstream 1.0kb upstream 4482   true chr8: 12129891-12134372 Medicago truncatula
Medtr8g032270 1.0kb upstream 1.0kb upstream 1000   false chr8: 12133373-12134372 Medicago truncatula
Medtr8g032270 1.0kb downstream 1.0kb downstream 4482   true chr8: 12128891-12133372 Medicago truncatula
Medtr8g032270 1.0kb downstream 1.0kb downstream 1000   false chr8: 12128891-12129890 Medicago truncatula
Medtr8g032270 2.0kb upstream 2.0kb upstream 5482   true chr8: 12129891-12135372 Medicago truncatula
Medtr8g032270 2.0kb upstream 2.0kb upstream 2000   false chr8: 12133373-12135372 Medicago truncatula
Medtr8g032270 2.0kb downstream 2.0kb downstream 5482   true chr8: 12127891-12133372 Medicago truncatula
Medtr8g032270 2.0kb downstream 2.0kb downstream 2000   false chr8: 12127891-12129890 Medicago truncatula
Medtr8g032270 5.0kb upstream 5.0kb upstream 8482   true chr8: 12129891-12138372 Medicago truncatula
Medtr8g032270 5.0kb upstream 5.0kb upstream 5000   false chr8: 12133373-12138372 Medicago truncatula
Medtr8g032270 5.0kb downstream 5.0kb downstream 8482   true chr8: 12124891-12133372 Medicago truncatula
Medtr8g032270 5.0kb downstream 5.0kb downstream 5000   false chr8: 12124891-12129890 Medicago truncatula
Medtr8g032270 10.0kb upstream 10.0kb upstream 13482   true chr8: 12129891-12143372 Medicago truncatula
Medtr8g032270 10.0kb upstream 10.0kb upstream 10000   false chr8: 12133373-12143372 Medicago truncatula
Medtr8g032270 10.0kb downstream 10.0kb downstream 13482   true chr8: 12119891-12133372 Medicago truncatula
Medtr8g032270 10.0kb downstream 10.0kb downstream 10000   false chr8: 12119891-12129890 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304927 5265 Fabidae View MSA
124068376 5270 Rosid View MSA
123738972 5271 Pentapetalae View MSA
122787583 5272 Eudicot View MSA
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.341       Low
cufflinks 2.045        
cufflinks 1.637        
cufflinks 0.829        
cufflinks 2.495       High
cufflinks 0.256       Low
cufflinks 1.085        
cufflinks 1.601        
cufflinks 1.647        

0 Strain