Gene : Medtr8g036235 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR10985//PTHR10985:SF42 - BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED // SUBFAMILY NOT NAMED Description:  transcription factor bHLH122-like protein
Genomic Order:  1775 Name:  ? Medtr8g036235
Secondary Identifier:  ? PAC:31074092
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g036235 0.5kb upstream 0.5kb upstream 5212   true chr8: 13407513-13412724 Medicago truncatula
Medtr8g036235 0.5kb upstream 0.5kb upstream 500   false chr8: 13412225-13412724 Medicago truncatula
Medtr8g036235 0.5kb downstream 0.5kb downstream 5212   true chr8: 13407013-13412224 Medicago truncatula
Medtr8g036235 0.5kb downstream 0.5kb downstream 500   false chr8: 13407013-13407512 Medicago truncatula
Medtr8g036235 1.0kb upstream 1.0kb upstream 5712   true chr8: 13407513-13413224 Medicago truncatula
Medtr8g036235 1.0kb upstream 1.0kb upstream 1000   false chr8: 13412225-13413224 Medicago truncatula
Medtr8g036235 1.0kb downstream 1.0kb downstream 5712   true chr8: 13406513-13412224 Medicago truncatula
Medtr8g036235 1.0kb downstream 1.0kb downstream 1000   false chr8: 13406513-13407512 Medicago truncatula
Medtr8g036235 2.0kb upstream 2.0kb upstream 6712   true chr8: 13407513-13414224 Medicago truncatula
Medtr8g036235 2.0kb upstream 2.0kb upstream 2000   false chr8: 13412225-13414224 Medicago truncatula
Medtr8g036235 2.0kb downstream 2.0kb downstream 6712   true chr8: 13405513-13412224 Medicago truncatula
Medtr8g036235 2.0kb downstream 2.0kb downstream 2000   false chr8: 13405513-13407512 Medicago truncatula
Medtr8g036235 5.0kb upstream 5.0kb upstream 9712   true chr8: 13407513-13417224 Medicago truncatula
Medtr8g036235 5.0kb upstream 5.0kb upstream 5000   false chr8: 13412225-13417224 Medicago truncatula
Medtr8g036235 5.0kb downstream 5.0kb downstream 9712   true chr8: 13402513-13412224 Medicago truncatula
Medtr8g036235 5.0kb downstream 5.0kb downstream 5000   false chr8: 13402513-13407512 Medicago truncatula
Medtr8g036235 10.0kb upstream 10.0kb upstream 14712   true chr8: 13407513-13422224 Medicago truncatula
Medtr8g036235 10.0kb upstream 10.0kb upstream 10000   false chr8: 13412225-13422224 Medicago truncatula
Medtr8g036235 10.0kb downstream 10.0kb downstream 14712   true chr8: 13397513-13412224 Medicago truncatula
Medtr8g036235 10.0kb downstream 10.0kb downstream 10000   false chr8: 13397513-13407512 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311169 5265 Fabidae View MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.915        
cufflinks 0.416       Low
cufflinks 4.644        
cufflinks 0.69        
cufflinks 0.594       Low
cufflinks 2.906        
cufflinks 6.618       High
cufflinks 1.013        
cufflinks 3.466        

0 Strain