Gene : Medtr8g037315 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Description:  carotenoid cleavage dioxygenase
Genomic Order:  1824 Name:  ? Medtr8g037315
Secondary Identifier:  ? PAC:31072811
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g037315 0.5kb upstream 0.5kb upstream 6943   true chr8: 13896651-13903593 Medicago truncatula
Medtr8g037315 0.5kb upstream 0.5kb upstream 500   false chr8: 13903094-13903593 Medicago truncatula
Medtr8g037315 0.5kb downstream 0.5kb downstream 6943   true chr8: 13896151-13903093 Medicago truncatula
Medtr8g037315 0.5kb downstream 0.5kb downstream 500   false chr8: 13896151-13896650 Medicago truncatula
Medtr8g037315 1.0kb upstream 1.0kb upstream 7443   true chr8: 13896651-13904093 Medicago truncatula
Medtr8g037315 1.0kb upstream 1.0kb upstream 1000   false chr8: 13903094-13904093 Medicago truncatula
Medtr8g037315 1.0kb downstream 1.0kb downstream 7443   true chr8: 13895651-13903093 Medicago truncatula
Medtr8g037315 1.0kb downstream 1.0kb downstream 1000   false chr8: 13895651-13896650 Medicago truncatula
Medtr8g037315 2.0kb upstream 2.0kb upstream 8443   true chr8: 13896651-13905093 Medicago truncatula
Medtr8g037315 2.0kb upstream 2.0kb upstream 2000   false chr8: 13903094-13905093 Medicago truncatula
Medtr8g037315 2.0kb downstream 2.0kb downstream 8443   true chr8: 13894651-13903093 Medicago truncatula
Medtr8g037315 2.0kb downstream 2.0kb downstream 2000   false chr8: 13894651-13896650 Medicago truncatula
Medtr8g037315 5.0kb upstream 5.0kb upstream 11443   true chr8: 13896651-13908093 Medicago truncatula
Medtr8g037315 5.0kb upstream 5.0kb upstream 5000   false chr8: 13903094-13908093 Medicago truncatula
Medtr8g037315 5.0kb downstream 5.0kb downstream 11443   true chr8: 13891651-13903093 Medicago truncatula
Medtr8g037315 5.0kb downstream 5.0kb downstream 5000   false chr8: 13891651-13896650 Medicago truncatula
Medtr8g037315 10.0kb upstream 10.0kb upstream 16443   true chr8: 13896651-13913093 Medicago truncatula
Medtr8g037315 10.0kb upstream 10.0kb upstream 10000   false chr8: 13903094-13913093 Medicago truncatula
Medtr8g037315 10.0kb downstream 10.0kb downstream 16443   true chr8: 13886651-13903093 Medicago truncatula
Medtr8g037315 10.0kb downstream 10.0kb downstream 10000   false chr8: 13886651-13896650 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305426 5265 Fabidae View MSA
124065010 5270 Rosid View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.185        
cufflinks 19.418     High High
cufflinks 5.886        
cufflinks 0.562       Low
cufflinks 15.753     High High
cufflinks 0.547       Low
cufflinks 1.392        
cufflinks 9.318     High  
cufflinks 2.389        

0 Strain