Gene : Medtr8g037260 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED Description:  cellulose synthase-like protein
Genomic Order:  1815 Name:  ? Medtr8g037260
Secondary Identifier:  ? PAC:31072028
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1001 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g037260 0.5kb upstream 0.5kb upstream 8784   true chr8: 13822074-13830857 Medicago truncatula
Medtr8g037260 0.5kb upstream 0.5kb upstream 500   false chr8: 13830358-13830857 Medicago truncatula
Medtr8g037260 0.5kb downstream 0.5kb downstream 8784   true chr8: 13821574-13830357 Medicago truncatula
Medtr8g037260 0.5kb downstream 0.5kb downstream 500   false chr8: 13821574-13822073 Medicago truncatula
Medtr8g037260 1.0kb upstream 1.0kb upstream 9284   true chr8: 13822074-13831357 Medicago truncatula
Medtr8g037260 1.0kb upstream 1.0kb upstream 1000   false chr8: 13830358-13831357 Medicago truncatula
Medtr8g037260 1.0kb downstream 1.0kb downstream 9284   true chr8: 13821074-13830357 Medicago truncatula
Medtr8g037260 1.0kb downstream 1.0kb downstream 1000   false chr8: 13821074-13822073 Medicago truncatula
Medtr8g037260 2.0kb upstream 2.0kb upstream 10284   true chr8: 13822074-13832357 Medicago truncatula
Medtr8g037260 2.0kb upstream 2.0kb upstream 2000   false chr8: 13830358-13832357 Medicago truncatula
Medtr8g037260 2.0kb downstream 2.0kb downstream 10284   true chr8: 13820074-13830357 Medicago truncatula
Medtr8g037260 2.0kb downstream 2.0kb downstream 2000   false chr8: 13820074-13822073 Medicago truncatula
Medtr8g037260 5.0kb upstream 5.0kb upstream 13284   true chr8: 13822074-13835357 Medicago truncatula
Medtr8g037260 5.0kb upstream 5.0kb upstream 5000   false chr8: 13830358-13835357 Medicago truncatula
Medtr8g037260 5.0kb downstream 5.0kb downstream 13284   true chr8: 13817074-13830357 Medicago truncatula
Medtr8g037260 5.0kb downstream 5.0kb downstream 5000   false chr8: 13817074-13822073 Medicago truncatula
Medtr8g037260 10.0kb upstream 10.0kb upstream 18284   true chr8: 13822074-13840357 Medicago truncatula
Medtr8g037260 10.0kb upstream 10.0kb upstream 10000   false chr8: 13830358-13840357 Medicago truncatula
Medtr8g037260 10.0kb downstream 10.0kb downstream 18284   true chr8: 13812074-13830357 Medicago truncatula
Medtr8g037260 10.0kb downstream 10.0kb downstream 10000   false chr8: 13812074-13822073 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.388     High High
cufflinks 0.99        
cufflinks 0.877        
cufflinks 0.474        
cufflinks 1.648        
cufflinks 0.192       Low
cufflinks 1.073        
cufflinks 0.946        
cufflinks 1.291        

0 Strain