Gene : Medtr8g037000 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3702 - Nuclear polyadenylated RNA binding protein Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  1785 Name:  ? Medtr8g037000
Secondary Identifier:  ? PAC:31073574
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g037000 0.5kb upstream 0.5kb upstream 7907   true chr8: 13486853-13494759 Medicago truncatula
Medtr8g037000 0.5kb upstream 0.5kb upstream 500   false chr8: 13486853-13487352 Medicago truncatula
Medtr8g037000 0.5kb downstream 0.5kb downstream 7907   true chr8: 13487353-13495259 Medicago truncatula
Medtr8g037000 0.5kb downstream 0.5kb downstream 500   false chr8: 13494760-13495259 Medicago truncatula
Medtr8g037000 1.0kb upstream 1.0kb upstream 8407   true chr8: 13486353-13494759 Medicago truncatula
Medtr8g037000 1.0kb upstream 1.0kb upstream 1000   false chr8: 13486353-13487352 Medicago truncatula
Medtr8g037000 1.0kb downstream 1.0kb downstream 8407   true chr8: 13487353-13495759 Medicago truncatula
Medtr8g037000 1.0kb downstream 1.0kb downstream 1000   false chr8: 13494760-13495759 Medicago truncatula
Medtr8g037000 2.0kb upstream 2.0kb upstream 9407   true chr8: 13485353-13494759 Medicago truncatula
Medtr8g037000 2.0kb upstream 2.0kb upstream 2000   false chr8: 13485353-13487352 Medicago truncatula
Medtr8g037000 2.0kb downstream 2.0kb downstream 9407   true chr8: 13487353-13496759 Medicago truncatula
Medtr8g037000 2.0kb downstream 2.0kb downstream 2000   false chr8: 13494760-13496759 Medicago truncatula
Medtr8g037000 5.0kb upstream 5.0kb upstream 12407   true chr8: 13482353-13494759 Medicago truncatula
Medtr8g037000 5.0kb upstream 5.0kb upstream 5000   false chr8: 13482353-13487352 Medicago truncatula
Medtr8g037000 5.0kb downstream 5.0kb downstream 12407   true chr8: 13487353-13499759 Medicago truncatula
Medtr8g037000 5.0kb downstream 5.0kb downstream 5000   false chr8: 13494760-13499759 Medicago truncatula
Medtr8g037000 10.0kb upstream 10.0kb upstream 17407   true chr8: 13477353-13494759 Medicago truncatula
Medtr8g037000 10.0kb upstream 10.0kb upstream 10000   false chr8: 13477353-13487352 Medicago truncatula
Medtr8g037000 10.0kb downstream 10.0kb downstream 17407   true chr8: 13487353-13504759 Medicago truncatula
Medtr8g037000 10.0kb downstream 10.0kb downstream 10000   false chr8: 13494760-13504759 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289702 5265 Fabidae View MSA
124029663 5270 Rosid View MSA
123744402 5271 Pentapetalae View MSA
122787071 5272 Eudicot View MSA
122046161 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121345767 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.524       High
cufflinks 0.675        
cufflinks 1.113        
cufflinks 0.288       Low
cufflinks 0.987        
cufflinks 0.616        
cufflinks 1.272        
cufflinks 0.78        
cufflinks 0.773        

0 Strain