Gene : Medtr8g038550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22836 - WD40 REPEAT PROTEIN Description:  flowering time control FY-like protein
Genomic Order:  1881 Name:  ? Medtr8g038550
Secondary Identifier:  ? PAC:31075040
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g038550 0.5kb upstream 0.5kb upstream 13914   true chr8: 14279271-14293184 Medicago truncatula
Medtr8g038550 0.5kb upstream 0.5kb upstream 500   false chr8: 14279271-14279770 Medicago truncatula
Medtr8g038550 0.5kb downstream 0.5kb downstream 13914   true chr8: 14279771-14293684 Medicago truncatula
Medtr8g038550 0.5kb downstream 0.5kb downstream 500   false chr8: 14293185-14293684 Medicago truncatula
Medtr8g038550 1.0kb upstream 1.0kb upstream 14414   true chr8: 14278771-14293184 Medicago truncatula
Medtr8g038550 1.0kb upstream 1.0kb upstream 1000   false chr8: 14278771-14279770 Medicago truncatula
Medtr8g038550 1.0kb downstream 1.0kb downstream 14414   true chr8: 14279771-14294184 Medicago truncatula
Medtr8g038550 1.0kb downstream 1.0kb downstream 1000   false chr8: 14293185-14294184 Medicago truncatula
Medtr8g038550 2.0kb upstream 2.0kb upstream 15414   true chr8: 14277771-14293184 Medicago truncatula
Medtr8g038550 2.0kb upstream 2.0kb upstream 2000   false chr8: 14277771-14279770 Medicago truncatula
Medtr8g038550 2.0kb downstream 2.0kb downstream 15414   true chr8: 14279771-14295184 Medicago truncatula
Medtr8g038550 2.0kb downstream 2.0kb downstream 2000   false chr8: 14293185-14295184 Medicago truncatula
Medtr8g038550 5.0kb upstream 5.0kb upstream 18414   true chr8: 14274771-14293184 Medicago truncatula
Medtr8g038550 5.0kb upstream 5.0kb upstream 5000   false chr8: 14274771-14279770 Medicago truncatula
Medtr8g038550 5.0kb downstream 5.0kb downstream 18414   true chr8: 14279771-14298184 Medicago truncatula
Medtr8g038550 5.0kb downstream 5.0kb downstream 5000   false chr8: 14293185-14298184 Medicago truncatula
Medtr8g038550 10.0kb upstream 10.0kb upstream 23414   true chr8: 14269771-14293184 Medicago truncatula
Medtr8g038550 10.0kb upstream 10.0kb upstream 10000   false chr8: 14269771-14279770 Medicago truncatula
Medtr8g038550 10.0kb downstream 10.0kb downstream 23414   true chr8: 14279771-14303184 Medicago truncatula
Medtr8g038550 10.0kb downstream 10.0kb downstream 10000   false chr8: 14293185-14303184 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308979 5265 Fabidae View MSA
124064551 5270 Rosid View MSA
123746547 5271 Pentapetalae View MSA
122787310 5272 Eudicot View MSA
122041977 5273 Angiosperm View MSA
123429083 5275 Viridiplantae View MSA
121345573 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08        
cufflinks 0.988        
cufflinks 1.144        
cufflinks 0.564       Low
cufflinks 1.548       High
cufflinks 0.44       Low
cufflinks 0.778        
cufflinks 0.967        
cufflinks 0.965        

0 Strain