Gene : Medtr8g038390 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Description:  uridine 5-monophosphate synthase-like protein
Genomic Order:  1871 Name:  ? Medtr8g038390
Secondary Identifier:  ? PAC:31072570
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-162 Medicago truncatula pathologic  
Mtruncatula PWY-5686 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g038390 0.5kb upstream 0.5kb upstream 6242   true chr8: 14237808-14244049 Medicago truncatula
Medtr8g038390 0.5kb upstream 0.5kb upstream 500   false chr8: 14243550-14244049 Medicago truncatula
Medtr8g038390 0.5kb downstream 0.5kb downstream 6242   true chr8: 14237308-14243549 Medicago truncatula
Medtr8g038390 0.5kb downstream 0.5kb downstream 500   false chr8: 14237308-14237807 Medicago truncatula
Medtr8g038390 1.0kb upstream 1.0kb upstream 6742   true chr8: 14237808-14244549 Medicago truncatula
Medtr8g038390 1.0kb upstream 1.0kb upstream 1000   false chr8: 14243550-14244549 Medicago truncatula
Medtr8g038390 1.0kb downstream 1.0kb downstream 6742   true chr8: 14236808-14243549 Medicago truncatula
Medtr8g038390 1.0kb downstream 1.0kb downstream 1000   false chr8: 14236808-14237807 Medicago truncatula
Medtr8g038390 2.0kb upstream 2.0kb upstream 7742   true chr8: 14237808-14245549 Medicago truncatula
Medtr8g038390 2.0kb upstream 2.0kb upstream 2000   false chr8: 14243550-14245549 Medicago truncatula
Medtr8g038390 2.0kb downstream 2.0kb downstream 7742   true chr8: 14235808-14243549 Medicago truncatula
Medtr8g038390 2.0kb downstream 2.0kb downstream 2000   false chr8: 14235808-14237807 Medicago truncatula
Medtr8g038390 5.0kb upstream 5.0kb upstream 10742   true chr8: 14237808-14248549 Medicago truncatula
Medtr8g038390 5.0kb upstream 5.0kb upstream 5000   false chr8: 14243550-14248549 Medicago truncatula
Medtr8g038390 5.0kb downstream 5.0kb downstream 10742   true chr8: 14232808-14243549 Medicago truncatula
Medtr8g038390 5.0kb downstream 5.0kb downstream 5000   false chr8: 14232808-14237807 Medicago truncatula
Medtr8g038390 10.0kb upstream 10.0kb upstream 15742   true chr8: 14237808-14253549 Medicago truncatula
Medtr8g038390 10.0kb upstream 10.0kb upstream 10000   false chr8: 14243550-14253549 Medicago truncatula
Medtr8g038390 10.0kb downstream 10.0kb downstream 15742   true chr8: 14227808-14243549 Medicago truncatula
Medtr8g038390 10.0kb downstream 10.0kb downstream 10000   false chr8: 14227808-14237807 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297723 5265 Fabidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153       Low
cufflinks 1.036        
cufflinks 1.045        
cufflinks 0.145       Low
cufflinks 1.589       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.422        
cufflinks 1.043        
cufflinks 0.588        

0 Strain