Gene : Medtr8g022280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Description:  COP1-interacting-like protein
Genomic Order:  1082 Name:  ? Medtr8g022280
Secondary Identifier:  ? PAC:31069366
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g022280 0.5kb upstream 0.5kb upstream 11213   true chr8: 7871209-7882421 Medicago truncatula
Medtr8g022280 0.5kb upstream 0.5kb upstream 500   false chr8: 7881922-7882421 Medicago truncatula
Medtr8g022280 0.5kb downstream 0.5kb downstream 11213   true chr8: 7870709-7881921 Medicago truncatula
Medtr8g022280 0.5kb downstream 0.5kb downstream 500   false chr8: 7870709-7871208 Medicago truncatula
Medtr8g022280 1.0kb upstream 1.0kb upstream 11713   true chr8: 7871209-7882921 Medicago truncatula
Medtr8g022280 1.0kb upstream 1.0kb upstream 1000   false chr8: 7881922-7882921 Medicago truncatula
Medtr8g022280 1.0kb downstream 1.0kb downstream 11713   true chr8: 7870209-7881921 Medicago truncatula
Medtr8g022280 1.0kb downstream 1.0kb downstream 1000   false chr8: 7870209-7871208 Medicago truncatula
Medtr8g022280 2.0kb upstream 2.0kb upstream 12713   true chr8: 7871209-7883921 Medicago truncatula
Medtr8g022280 2.0kb upstream 2.0kb upstream 2000   false chr8: 7881922-7883921 Medicago truncatula
Medtr8g022280 2.0kb downstream 2.0kb downstream 12713   true chr8: 7869209-7881921 Medicago truncatula
Medtr8g022280 2.0kb downstream 2.0kb downstream 2000   false chr8: 7869209-7871208 Medicago truncatula
Medtr8g022280 5.0kb upstream 5.0kb upstream 15713   true chr8: 7871209-7886921 Medicago truncatula
Medtr8g022280 5.0kb upstream 5.0kb upstream 5000   false chr8: 7881922-7886921 Medicago truncatula
Medtr8g022280 5.0kb downstream 5.0kb downstream 15713   true chr8: 7866209-7881921 Medicago truncatula
Medtr8g022280 5.0kb downstream 5.0kb downstream 5000   false chr8: 7866209-7871208 Medicago truncatula
Medtr8g022280 10.0kb upstream 10.0kb upstream 20713   true chr8: 7871209-7891921 Medicago truncatula
Medtr8g022280 10.0kb upstream 10.0kb upstream 10000   false chr8: 7881922-7891921 Medicago truncatula
Medtr8g022280 10.0kb downstream 10.0kb downstream 20713   true chr8: 7861209-7881921 Medicago truncatula
Medtr8g022280 10.0kb downstream 10.0kb downstream 10000   false chr8: 7861209-7871208 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311279 5265 Fabidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.744        
cufflinks 0.943        
cufflinks 0.775        
cufflinks 0.211       Low
cufflinks 1.526       High
cufflinks 0.085     Low Low
cufflinks 0.653        
cufflinks 0.784        
cufflinks 0.709        

0 Strain