Gene : Medtr8g022010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13003 - NUP107-RELATED Description:  nuclear pore protein
Genomic Order:  1068 Name:  ? Medtr8g022010
Secondary Identifier:  ? PAC:31073445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g022010 0.5kb upstream 0.5kb upstream 19196   true chr8: 7723579-7742774 Medicago truncatula
Medtr8g022010 0.5kb upstream 0.5kb upstream 500   false chr8: 7723579-7724078 Medicago truncatula
Medtr8g022010 0.5kb downstream 0.5kb downstream 19196   true chr8: 7724079-7743274 Medicago truncatula
Medtr8g022010 0.5kb downstream 0.5kb downstream 500   false chr8: 7742775-7743274 Medicago truncatula
Medtr8g022010 1.0kb upstream 1.0kb upstream 19696   true chr8: 7723079-7742774 Medicago truncatula
Medtr8g022010 1.0kb upstream 1.0kb upstream 1000   false chr8: 7723079-7724078 Medicago truncatula
Medtr8g022010 1.0kb downstream 1.0kb downstream 19696   true chr8: 7724079-7743774 Medicago truncatula
Medtr8g022010 1.0kb downstream 1.0kb downstream 1000   false chr8: 7742775-7743774 Medicago truncatula
Medtr8g022010 2.0kb upstream 2.0kb upstream 20696   true chr8: 7722079-7742774 Medicago truncatula
Medtr8g022010 2.0kb upstream 2.0kb upstream 2000   false chr8: 7722079-7724078 Medicago truncatula
Medtr8g022010 2.0kb downstream 2.0kb downstream 20696   true chr8: 7724079-7744774 Medicago truncatula
Medtr8g022010 2.0kb downstream 2.0kb downstream 2000   false chr8: 7742775-7744774 Medicago truncatula
Medtr8g022010 5.0kb upstream 5.0kb upstream 23696   true chr8: 7719079-7742774 Medicago truncatula
Medtr8g022010 5.0kb upstream 5.0kb upstream 5000   false chr8: 7719079-7724078 Medicago truncatula
Medtr8g022010 5.0kb downstream 5.0kb downstream 23696   true chr8: 7724079-7747774 Medicago truncatula
Medtr8g022010 5.0kb downstream 5.0kb downstream 5000   false chr8: 7742775-7747774 Medicago truncatula
Medtr8g022010 10.0kb upstream 10.0kb upstream 28696   true chr8: 7714079-7742774 Medicago truncatula
Medtr8g022010 10.0kb upstream 10.0kb upstream 10000   false chr8: 7714079-7724078 Medicago truncatula
Medtr8g022010 10.0kb downstream 10.0kb downstream 28696   true chr8: 7724079-7752774 Medicago truncatula
Medtr8g022010 10.0kb downstream 10.0kb downstream 10000   false chr8: 7742775-7752774 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301578 5265 Fabidae View MSA
124070928 5270 Rosid View MSA
123739488 5271 Pentapetalae View MSA
122790243 5272 Eudicot View MSA
122044526 5273 Angiosperm View MSA
121345547 5274 Embryophyte View MSA
123425795 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.654        
cufflinks 0.95        
cufflinks 1.214        
cufflinks 0.672        
cufflinks 1.681        
cufflinks 0.381       Low
cufflinks 1.366        
cufflinks 1.106        
cufflinks 1.381        

0 Strain