Gene : Medtr8g023080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11353//PTHR11353:SF93 - CHAPERONIN Description:  1-phosphatidylinositol-3-phosphate 5-kinase
Genomic Order:  1134 Name:  ? Medtr8g023080
Secondary Identifier:  ? PAC:31075585
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g023080 0.5kb upstream 0.5kb upstream 12354   true chr8: 8244083-8256436 Medicago truncatula
Medtr8g023080 0.5kb upstream 0.5kb upstream 500   false chr8: 8244083-8244582 Medicago truncatula
Medtr8g023080 0.5kb downstream 0.5kb downstream 12354   true chr8: 8244583-8256936 Medicago truncatula
Medtr8g023080 0.5kb downstream 0.5kb downstream 500   false chr8: 8256437-8256936 Medicago truncatula
Medtr8g023080 1.0kb upstream 1.0kb upstream 12854   true chr8: 8243583-8256436 Medicago truncatula
Medtr8g023080 1.0kb upstream 1.0kb upstream 1000   false chr8: 8243583-8244582 Medicago truncatula
Medtr8g023080 1.0kb downstream 1.0kb downstream 12854   true chr8: 8244583-8257436 Medicago truncatula
Medtr8g023080 1.0kb downstream 1.0kb downstream 1000   false chr8: 8256437-8257436 Medicago truncatula
Medtr8g023080 2.0kb upstream 2.0kb upstream 13854   true chr8: 8242583-8256436 Medicago truncatula
Medtr8g023080 2.0kb upstream 2.0kb upstream 2000   false chr8: 8242583-8244582 Medicago truncatula
Medtr8g023080 2.0kb downstream 2.0kb downstream 13854   true chr8: 8244583-8258436 Medicago truncatula
Medtr8g023080 2.0kb downstream 2.0kb downstream 2000   false chr8: 8256437-8258436 Medicago truncatula
Medtr8g023080 5.0kb upstream 5.0kb upstream 16854   true chr8: 8239583-8256436 Medicago truncatula
Medtr8g023080 5.0kb upstream 5.0kb upstream 5000   false chr8: 8239583-8244582 Medicago truncatula
Medtr8g023080 5.0kb downstream 5.0kb downstream 16854   true chr8: 8244583-8261436 Medicago truncatula
Medtr8g023080 5.0kb downstream 5.0kb downstream 5000   false chr8: 8256437-8261436 Medicago truncatula
Medtr8g023080 10.0kb upstream 10.0kb upstream 21854   true chr8: 8234583-8256436 Medicago truncatula
Medtr8g023080 10.0kb upstream 10.0kb upstream 10000   false chr8: 8234583-8244582 Medicago truncatula
Medtr8g023080 10.0kb downstream 10.0kb downstream 21854   true chr8: 8244583-8266436 Medicago truncatula
Medtr8g023080 10.0kb downstream 10.0kb downstream 10000   false chr8: 8256437-8266436 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301850 5265 Fabidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.663        
cufflinks 3.26        
cufflinks 3.278        
cufflinks 0.748       Low
cufflinks 2.734        
cufflinks 1.361       Low
cufflinks 2.991        
cufflinks 2.391        
cufflinks 2.379        

0 Strain