Gene : Medtr8g022470 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Description:  S49 protease IV family peptidase
Genomic Order:  1097 Name:  ? Medtr8g022470
Secondary Identifier:  ? PAC:31076262
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g022470 0.5kb upstream 0.5kb upstream 1618   true chr8: 7961658-7963275 Medicago truncatula
Medtr8g022470 0.5kb upstream 0.5kb upstream 500   false chr8: 7962776-7963275 Medicago truncatula
Medtr8g022470 0.5kb downstream 0.5kb downstream 1618   true chr8: 7961158-7962775 Medicago truncatula
Medtr8g022470 0.5kb downstream 0.5kb downstream 500   false chr8: 7961158-7961657 Medicago truncatula
Medtr8g022470 1.0kb upstream 1.0kb upstream 2118   true chr8: 7961658-7963775 Medicago truncatula
Medtr8g022470 1.0kb upstream 1.0kb upstream 1000   false chr8: 7962776-7963775 Medicago truncatula
Medtr8g022470 1.0kb downstream 1.0kb downstream 2118   true chr8: 7960658-7962775 Medicago truncatula
Medtr8g022470 1.0kb downstream 1.0kb downstream 1000   false chr8: 7960658-7961657 Medicago truncatula
Medtr8g022470 2.0kb upstream 2.0kb upstream 3118   true chr8: 7961658-7964775 Medicago truncatula
Medtr8g022470 2.0kb upstream 2.0kb upstream 2000   false chr8: 7962776-7964775 Medicago truncatula
Medtr8g022470 2.0kb downstream 2.0kb downstream 3118   true chr8: 7959658-7962775 Medicago truncatula
Medtr8g022470 2.0kb downstream 2.0kb downstream 2000   false chr8: 7959658-7961657 Medicago truncatula
Medtr8g022470 5.0kb upstream 5.0kb upstream 6118   true chr8: 7961658-7967775 Medicago truncatula
Medtr8g022470 5.0kb upstream 5.0kb upstream 5000   false chr8: 7962776-7967775 Medicago truncatula
Medtr8g022470 5.0kb downstream 5.0kb downstream 6118   true chr8: 7956658-7962775 Medicago truncatula
Medtr8g022470 5.0kb downstream 5.0kb downstream 5000   false chr8: 7956658-7961657 Medicago truncatula
Medtr8g022470 10.0kb upstream 10.0kb upstream 11118   true chr8: 7961658-7972775 Medicago truncatula
Medtr8g022470 10.0kb upstream 10.0kb upstream 10000   false chr8: 7962776-7972775 Medicago truncatula
Medtr8g022470 10.0kb downstream 10.0kb downstream 11118   true chr8: 7951658-7962775 Medicago truncatula
Medtr8g022470 10.0kb downstream 10.0kb downstream 10000   false chr8: 7951658-7961657 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779447 5273 Angiosperm View MSA
122298919 5265 Fabidae View MSA
124036641 5270 Rosid View MSA
123742912 5271 Pentapetalae View MSA
122770439 5272 Eudicot View MSA
121051107 5274 Embryophyte View MSA
123426271 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.18        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.236        
cufflinks 0.009     Low Low
cufflinks 0.218        
cufflinks 0.453        
cufflinks 0.021     Low Low
cufflinks 0.244        

0 Strain