Gene : Medtr8g023560 M. truncatula Mt4.0v1
Defline:  (1 of 21) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Description:  strubbelig-receptor family 6 protein
Genomic Order:  1163 Name:  ? Medtr8g023560
Secondary Identifier:  ? PAC:31070496
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g023560 0.5kb upstream 0.5kb upstream 7795   true chr8: 8531500-8539294 Medicago truncatula
Medtr8g023560 0.5kb upstream 0.5kb upstream 500   false chr8: 8538795-8539294 Medicago truncatula
Medtr8g023560 0.5kb downstream 0.5kb downstream 7795   true chr8: 8531000-8538794 Medicago truncatula
Medtr8g023560 0.5kb downstream 0.5kb downstream 500   false chr8: 8531000-8531499 Medicago truncatula
Medtr8g023560 1.0kb upstream 1.0kb upstream 8295   true chr8: 8531500-8539794 Medicago truncatula
Medtr8g023560 1.0kb upstream 1.0kb upstream 1000   false chr8: 8538795-8539794 Medicago truncatula
Medtr8g023560 1.0kb downstream 1.0kb downstream 8295   true chr8: 8530500-8538794 Medicago truncatula
Medtr8g023560 1.0kb downstream 1.0kb downstream 1000   false chr8: 8530500-8531499 Medicago truncatula
Medtr8g023560 2.0kb upstream 2.0kb upstream 9295   true chr8: 8531500-8540794 Medicago truncatula
Medtr8g023560 2.0kb upstream 2.0kb upstream 2000   false chr8: 8538795-8540794 Medicago truncatula
Medtr8g023560 2.0kb downstream 2.0kb downstream 9295   true chr8: 8529500-8538794 Medicago truncatula
Medtr8g023560 2.0kb downstream 2.0kb downstream 2000   false chr8: 8529500-8531499 Medicago truncatula
Medtr8g023560 5.0kb upstream 5.0kb upstream 12295   true chr8: 8531500-8543794 Medicago truncatula
Medtr8g023560 5.0kb upstream 5.0kb upstream 5000   false chr8: 8538795-8543794 Medicago truncatula
Medtr8g023560 5.0kb downstream 5.0kb downstream 12295   true chr8: 8526500-8538794 Medicago truncatula
Medtr8g023560 5.0kb downstream 5.0kb downstream 5000   false chr8: 8526500-8531499 Medicago truncatula
Medtr8g023560 10.0kb upstream 10.0kb upstream 17295   true chr8: 8531500-8548794 Medicago truncatula
Medtr8g023560 10.0kb upstream 10.0kb upstream 10000   false chr8: 8538795-8548794 Medicago truncatula
Medtr8g023560 10.0kb downstream 10.0kb downstream 17295   true chr8: 8521500-8538794 Medicago truncatula
Medtr8g023560 10.0kb downstream 10.0kb downstream 10000   false chr8: 8521500-8531499 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311719 5265 Fabidae View MSA
124065018 5270 Rosid View MSA
123737395 5271 Pentapetalae View MSA
122789526 5272 Eudicot View MSA
122050311 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.433       High
cufflinks 6.688        
cufflinks 6.513        
cufflinks 3.831       Low
cufflinks 6.199        
cufflinks 3.21       Low
cufflinks 5.635        
cufflinks 6.028        
cufflinks 8.204        

0 Strain