Gene : Medtr8g023400 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Description:  zinc finger, C3HC4 type (RING finger) protein
Genomic Order:  1155 Name:  ? Medtr8g023400
Secondary Identifier:  ? PAC:31072015
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g023400 0.5kb upstream 0.5kb upstream 2246   true chr8: 8433493-8435738 Medicago truncatula
Medtr8g023400 0.5kb upstream 0.5kb upstream 500   false chr8: 8435239-8435738 Medicago truncatula
Medtr8g023400 0.5kb downstream 0.5kb downstream 2246   true chr8: 8432993-8435238 Medicago truncatula
Medtr8g023400 0.5kb downstream 0.5kb downstream 500   false chr8: 8432993-8433492 Medicago truncatula
Medtr8g023400 1.0kb upstream 1.0kb upstream 2746   true chr8: 8433493-8436238 Medicago truncatula
Medtr8g023400 1.0kb upstream 1.0kb upstream 1000   false chr8: 8435239-8436238 Medicago truncatula
Medtr8g023400 1.0kb downstream 1.0kb downstream 2746   true chr8: 8432493-8435238 Medicago truncatula
Medtr8g023400 1.0kb downstream 1.0kb downstream 1000   false chr8: 8432493-8433492 Medicago truncatula
Medtr8g023400 2.0kb upstream 2.0kb upstream 3746   true chr8: 8433493-8437238 Medicago truncatula
Medtr8g023400 2.0kb upstream 2.0kb upstream 2000   false chr8: 8435239-8437238 Medicago truncatula
Medtr8g023400 2.0kb downstream 2.0kb downstream 3746   true chr8: 8431493-8435238 Medicago truncatula
Medtr8g023400 2.0kb downstream 2.0kb downstream 2000   false chr8: 8431493-8433492 Medicago truncatula
Medtr8g023400 5.0kb upstream 5.0kb upstream 6746   true chr8: 8433493-8440238 Medicago truncatula
Medtr8g023400 5.0kb upstream 5.0kb upstream 5000   false chr8: 8435239-8440238 Medicago truncatula
Medtr8g023400 5.0kb downstream 5.0kb downstream 6746   true chr8: 8428493-8435238 Medicago truncatula
Medtr8g023400 5.0kb downstream 5.0kb downstream 5000   false chr8: 8428493-8433492 Medicago truncatula
Medtr8g023400 10.0kb upstream 10.0kb upstream 11746   true chr8: 8433493-8445238 Medicago truncatula
Medtr8g023400 10.0kb upstream 10.0kb upstream 10000   false chr8: 8435239-8445238 Medicago truncatula
Medtr8g023400 10.0kb downstream 10.0kb downstream 11746   true chr8: 8423493-8435238 Medicago truncatula
Medtr8g023400 10.0kb downstream 10.0kb downstream 10000   false chr8: 8423493-8433492 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301564 5265 Fabidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.474       High
cufflinks 1.283       Low
cufflinks 3.832        
cufflinks 5.652        
cufflinks 3.635        
cufflinks 3.767        
cufflinks 8.194       High
cufflinks 2.358        
cufflinks 2.676        

0 Strain