Gene : Medtr8g023310 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  1150 Name:  ? Medtr8g023310
Secondary Identifier:  ? PAC:31074389
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g023310 0.5kb upstream 0.5kb upstream 6363   true chr8: 8379969-8386331 Medicago truncatula
Medtr8g023310 0.5kb upstream 0.5kb upstream 500   false chr8: 8385832-8386331 Medicago truncatula
Medtr8g023310 0.5kb downstream 0.5kb downstream 6363   true chr8: 8379469-8385831 Medicago truncatula
Medtr8g023310 0.5kb downstream 0.5kb downstream 500   false chr8: 8379469-8379968 Medicago truncatula
Medtr8g023310 1.0kb upstream 1.0kb upstream 6863   true chr8: 8379969-8386831 Medicago truncatula
Medtr8g023310 1.0kb upstream 1.0kb upstream 1000   false chr8: 8385832-8386831 Medicago truncatula
Medtr8g023310 1.0kb downstream 1.0kb downstream 6863   true chr8: 8378969-8385831 Medicago truncatula
Medtr8g023310 1.0kb downstream 1.0kb downstream 1000   false chr8: 8378969-8379968 Medicago truncatula
Medtr8g023310 2.0kb upstream 2.0kb upstream 7863   true chr8: 8379969-8387831 Medicago truncatula
Medtr8g023310 2.0kb upstream 2.0kb upstream 2000   false chr8: 8385832-8387831 Medicago truncatula
Medtr8g023310 2.0kb downstream 2.0kb downstream 7863   true chr8: 8377969-8385831 Medicago truncatula
Medtr8g023310 2.0kb downstream 2.0kb downstream 2000   false chr8: 8377969-8379968 Medicago truncatula
Medtr8g023310 5.0kb upstream 5.0kb upstream 10863   true chr8: 8379969-8390831 Medicago truncatula
Medtr8g023310 5.0kb upstream 5.0kb upstream 5000   false chr8: 8385832-8390831 Medicago truncatula
Medtr8g023310 5.0kb downstream 5.0kb downstream 10863   true chr8: 8374969-8385831 Medicago truncatula
Medtr8g023310 5.0kb downstream 5.0kb downstream 5000   false chr8: 8374969-8379968 Medicago truncatula
Medtr8g023310 10.0kb upstream 10.0kb upstream 15863   true chr8: 8379969-8395831 Medicago truncatula
Medtr8g023310 10.0kb upstream 10.0kb upstream 10000   false chr8: 8385832-8395831 Medicago truncatula
Medtr8g023310 10.0kb downstream 10.0kb downstream 15863   true chr8: 8369969-8385831 Medicago truncatula
Medtr8g023310 10.0kb downstream 10.0kb downstream 10000   false chr8: 8369969-8379968 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313065 5265 Fabidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398       Low
cufflinks 31.373     High  
cufflinks 30.268     High  
cufflinks 0.885       Low
cufflinks 44.122     High High
cufflinks 1.433        
cufflinks 3.182        
cufflinks 31.671     High  
cufflinks 8.688        

0 Strain