Gene : Medtr8g023990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31140:SF4 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Description:  B3 DNA-binding domain protein
Genomic Order:  1191 Name:  ? Medtr8g023990
Secondary Identifier:  ? PAC:31071827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g023990 0.5kb upstream 0.5kb upstream 2631   true chr8: 8774219-8776849 Medicago truncatula
Medtr8g023990 0.5kb upstream 0.5kb upstream 500   false chr8: 8776350-8776849 Medicago truncatula
Medtr8g023990 0.5kb downstream 0.5kb downstream 2631   true chr8: 8773719-8776349 Medicago truncatula
Medtr8g023990 0.5kb downstream 0.5kb downstream 500   false chr8: 8773719-8774218 Medicago truncatula
Medtr8g023990 1.0kb upstream 1.0kb upstream 3131   true chr8: 8774219-8777349 Medicago truncatula
Medtr8g023990 1.0kb upstream 1.0kb upstream 1000   false chr8: 8776350-8777349 Medicago truncatula
Medtr8g023990 1.0kb downstream 1.0kb downstream 3131   true chr8: 8773219-8776349 Medicago truncatula
Medtr8g023990 1.0kb downstream 1.0kb downstream 1000   false chr8: 8773219-8774218 Medicago truncatula
Medtr8g023990 2.0kb upstream 2.0kb upstream 4131   true chr8: 8774219-8778349 Medicago truncatula
Medtr8g023990 2.0kb upstream 2.0kb upstream 2000   false chr8: 8776350-8778349 Medicago truncatula
Medtr8g023990 2.0kb downstream 2.0kb downstream 4131   true chr8: 8772219-8776349 Medicago truncatula
Medtr8g023990 2.0kb downstream 2.0kb downstream 2000   false chr8: 8772219-8774218 Medicago truncatula
Medtr8g023990 5.0kb upstream 5.0kb upstream 7131   true chr8: 8774219-8781349 Medicago truncatula
Medtr8g023990 5.0kb upstream 5.0kb upstream 5000   false chr8: 8776350-8781349 Medicago truncatula
Medtr8g023990 5.0kb downstream 5.0kb downstream 7131   true chr8: 8769219-8776349 Medicago truncatula
Medtr8g023990 5.0kb downstream 5.0kb downstream 5000   false chr8: 8769219-8774218 Medicago truncatula
Medtr8g023990 10.0kb upstream 10.0kb upstream 12131   true chr8: 8774219-8786349 Medicago truncatula
Medtr8g023990 10.0kb upstream 10.0kb upstream 10000   false chr8: 8776350-8786349 Medicago truncatula
Medtr8g023990 10.0kb downstream 10.0kb downstream 12131   true chr8: 8764219-8776349 Medicago truncatula
Medtr8g023990 10.0kb downstream 10.0kb downstream 10000   false chr8: 8764219-8774218 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313330 5265 Fabidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.407     High  
cufflinks 6.475        
cufflinks 6.193        
cufflinks 0.032     Low Low
cufflinks 7.168        
cufflinks 0.259        
cufflinks 0.3        
cufflinks 5.314        
cufflinks 0.165        

0 Strain