Gene : Medtr8g027610 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10666//PTHR10666:SF138 - UBIQUITIN Description:  phosphatidylinositol 3- and 4-kinase family protein
Genomic Order:  1308 Name:  ? Medtr8g027610
Secondary Identifier:  ? PAC:31072652
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027610 0.5kb upstream 0.5kb upstream 3807   true chr8: 9918032-9921838 Medicago truncatula
Medtr8g027610 0.5kb upstream 0.5kb upstream 500   false chr8: 9921339-9921838 Medicago truncatula
Medtr8g027610 0.5kb downstream 0.5kb downstream 3807   true chr8: 9917532-9921338 Medicago truncatula
Medtr8g027610 0.5kb downstream 0.5kb downstream 500   false chr8: 9917532-9918031 Medicago truncatula
Medtr8g027610 1.0kb upstream 1.0kb upstream 4307   true chr8: 9918032-9922338 Medicago truncatula
Medtr8g027610 1.0kb upstream 1.0kb upstream 1000   false chr8: 9921339-9922338 Medicago truncatula
Medtr8g027610 1.0kb downstream 1.0kb downstream 4307   true chr8: 9917032-9921338 Medicago truncatula
Medtr8g027610 1.0kb downstream 1.0kb downstream 1000   false chr8: 9917032-9918031 Medicago truncatula
Medtr8g027610 2.0kb upstream 2.0kb upstream 5307   true chr8: 9918032-9923338 Medicago truncatula
Medtr8g027610 2.0kb upstream 2.0kb upstream 2000   false chr8: 9921339-9923338 Medicago truncatula
Medtr8g027610 2.0kb downstream 2.0kb downstream 5307   true chr8: 9916032-9921338 Medicago truncatula
Medtr8g027610 2.0kb downstream 2.0kb downstream 2000   false chr8: 9916032-9918031 Medicago truncatula
Medtr8g027610 5.0kb upstream 5.0kb upstream 8307   true chr8: 9918032-9926338 Medicago truncatula
Medtr8g027610 5.0kb upstream 5.0kb upstream 5000   false chr8: 9921339-9926338 Medicago truncatula
Medtr8g027610 5.0kb downstream 5.0kb downstream 8307   true chr8: 9913032-9921338 Medicago truncatula
Medtr8g027610 5.0kb downstream 5.0kb downstream 5000   false chr8: 9913032-9918031 Medicago truncatula
Medtr8g027610 10.0kb upstream 10.0kb upstream 13307   true chr8: 9918032-9931338 Medicago truncatula
Medtr8g027610 10.0kb upstream 10.0kb upstream 10000   false chr8: 9921339-9931338 Medicago truncatula
Medtr8g027610 10.0kb downstream 10.0kb downstream 13307   true chr8: 9908032-9921338 Medicago truncatula
Medtr8g027610 10.0kb downstream 10.0kb downstream 10000   false chr8: 9908032-9918031 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.25     High  
cufflinks 36.382     High  
cufflinks 50.33     High  
cufflinks 25.246     High Low
cufflinks 38.987     High  
cufflinks 29.804     High Low
cufflinks 74.375     High High
cufflinks 40.576     High  
cufflinks 64.776     High High

0 Strain