Gene : Medtr8g027700 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Description:  trafficking protein particle complex subunit-like protein
Genomic Order:  1316 Name:  ? Medtr8g027700
Secondary Identifier:  ? PAC:31074998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027700 0.5kb upstream 0.5kb upstream 6703   true chr8: 9998367-10005069 Medicago truncatula
Medtr8g027700 0.5kb upstream 0.5kb upstream 500   false chr8: 9998367-9998866 Medicago truncatula
Medtr8g027700 0.5kb downstream 0.5kb downstream 6703   true chr8: 9998867-10005569 Medicago truncatula
Medtr8g027700 0.5kb downstream 0.5kb downstream 500   false chr8: 10005070-10005569 Medicago truncatula
Medtr8g027700 1.0kb upstream 1.0kb upstream 7203   true chr8: 9997867-10005069 Medicago truncatula
Medtr8g027700 1.0kb upstream 1.0kb upstream 1000   false chr8: 9997867-9998866 Medicago truncatula
Medtr8g027700 1.0kb downstream 1.0kb downstream 7203   true chr8: 9998867-10006069 Medicago truncatula
Medtr8g027700 1.0kb downstream 1.0kb downstream 1000   false chr8: 10005070-10006069 Medicago truncatula
Medtr8g027700 2.0kb upstream 2.0kb upstream 8203   true chr8: 9996867-10005069 Medicago truncatula
Medtr8g027700 2.0kb upstream 2.0kb upstream 2000   false chr8: 9996867-9998866 Medicago truncatula
Medtr8g027700 2.0kb downstream 2.0kb downstream 8203   true chr8: 9998867-10007069 Medicago truncatula
Medtr8g027700 2.0kb downstream 2.0kb downstream 2000   false chr8: 10005070-10007069 Medicago truncatula
Medtr8g027700 5.0kb upstream 5.0kb upstream 11203   true chr8: 9993867-10005069 Medicago truncatula
Medtr8g027700 5.0kb upstream 5.0kb upstream 5000   false chr8: 9993867-9998866 Medicago truncatula
Medtr8g027700 5.0kb downstream 5.0kb downstream 11203   true chr8: 9998867-10010069 Medicago truncatula
Medtr8g027700 5.0kb downstream 5.0kb downstream 5000   false chr8: 10005070-10010069 Medicago truncatula
Medtr8g027700 10.0kb upstream 10.0kb upstream 16203   true chr8: 9988867-10005069 Medicago truncatula
Medtr8g027700 10.0kb upstream 10.0kb upstream 10000   false chr8: 9988867-9998866 Medicago truncatula
Medtr8g027700 10.0kb downstream 10.0kb downstream 16203   true chr8: 9998867-10015069 Medicago truncatula
Medtr8g027700 10.0kb downstream 10.0kb downstream 10000   false chr8: 10005070-10015069 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289725 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.124       Low
cufflinks 0.219        
cufflinks 0.606       High
cufflinks 0.229        
cufflinks 0.239        
cufflinks 0.086     Low Low
cufflinks 0.245        
cufflinks 0.32        
cufflinks 0.257        

0 Strain