Gene : Medtr8g028180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21668:SF5 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN-RELATED Description:  eukaryotic translation initiation factor 1A-like protein
Genomic Order:  1392 Name:  ? Medtr8g028180
Secondary Identifier:  ? PAC:31070462
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028180 0.5kb upstream 0.5kb upstream 1473   true chr8: 10520047-10521519 Medicago truncatula
Medtr8g028180 0.5kb upstream 0.5kb upstream 500   false chr8: 10521020-10521519 Medicago truncatula
Medtr8g028180 0.5kb downstream 0.5kb downstream 1473   true chr8: 10519547-10521019 Medicago truncatula
Medtr8g028180 0.5kb downstream 0.5kb downstream 500   false chr8: 10519547-10520046 Medicago truncatula
Medtr8g028180 1.0kb upstream 1.0kb upstream 1973   true chr8: 10520047-10522019 Medicago truncatula
Medtr8g028180 1.0kb upstream 1.0kb upstream 1000   false chr8: 10521020-10522019 Medicago truncatula
Medtr8g028180 1.0kb downstream 1.0kb downstream 1973   true chr8: 10519047-10521019 Medicago truncatula
Medtr8g028180 1.0kb downstream 1.0kb downstream 1000   false chr8: 10519047-10520046 Medicago truncatula
Medtr8g028180 2.0kb upstream 2.0kb upstream 2973   true chr8: 10520047-10523019 Medicago truncatula
Medtr8g028180 2.0kb upstream 2.0kb upstream 2000   false chr8: 10521020-10523019 Medicago truncatula
Medtr8g028180 2.0kb downstream 2.0kb downstream 2973   true chr8: 10518047-10521019 Medicago truncatula
Medtr8g028180 2.0kb downstream 2.0kb downstream 2000   false chr8: 10518047-10520046 Medicago truncatula
Medtr8g028180 5.0kb upstream 5.0kb upstream 5973   true chr8: 10520047-10526019 Medicago truncatula
Medtr8g028180 5.0kb upstream 5.0kb upstream 5000   false chr8: 10521020-10526019 Medicago truncatula
Medtr8g028180 5.0kb downstream 5.0kb downstream 5973   true chr8: 10515047-10521019 Medicago truncatula
Medtr8g028180 5.0kb downstream 5.0kb downstream 5000   false chr8: 10515047-10520046 Medicago truncatula
Medtr8g028180 10.0kb upstream 10.0kb upstream 10973   true chr8: 10520047-10531019 Medicago truncatula
Medtr8g028180 10.0kb upstream 10.0kb upstream 10000   false chr8: 10521020-10531019 Medicago truncatula
Medtr8g028180 10.0kb downstream 10.0kb downstream 10973   true chr8: 10510047-10521019 Medicago truncatula
Medtr8g028180 10.0kb downstream 10.0kb downstream 10000   false chr8: 10510047-10520046 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309063 5265 Fabidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 364.722     High  
cufflinks 260.117     High Low
cufflinks 342.807     High  
cufflinks 557.985     High High
cufflinks 279.26     High  
cufflinks 613.84     High High
cufflinks 411.55     High  
cufflinks 279.151     High  
cufflinks 323.449     High  

0 Strain