Gene : Medtr8g028030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF08167 - rRNA processing/ribosome biogenesis (RIX1) Description:  rRNA processing/ribosome biogenesis protein
Genomic Order:  1368 Name:  ? Medtr8g028030
Secondary Identifier:  ? PAC:31075185
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028030 0.5kb upstream 0.5kb upstream 10842   true chr8: 10366589-10377430 Medicago truncatula
Medtr8g028030 0.5kb upstream 0.5kb upstream 500   false chr8: 10366589-10367088 Medicago truncatula
Medtr8g028030 0.5kb downstream 0.5kb downstream 10842   true chr8: 10367089-10377930 Medicago truncatula
Medtr8g028030 0.5kb downstream 0.5kb downstream 500   false chr8: 10377431-10377930 Medicago truncatula
Medtr8g028030 1.0kb upstream 1.0kb upstream 11342   true chr8: 10366089-10377430 Medicago truncatula
Medtr8g028030 1.0kb upstream 1.0kb upstream 1000   false chr8: 10366089-10367088 Medicago truncatula
Medtr8g028030 1.0kb downstream 1.0kb downstream 11342   true chr8: 10367089-10378430 Medicago truncatula
Medtr8g028030 1.0kb downstream 1.0kb downstream 1000   false chr8: 10377431-10378430 Medicago truncatula
Medtr8g028030 2.0kb upstream 2.0kb upstream 12342   true chr8: 10365089-10377430 Medicago truncatula
Medtr8g028030 2.0kb upstream 2.0kb upstream 2000   false chr8: 10365089-10367088 Medicago truncatula
Medtr8g028030 2.0kb downstream 2.0kb downstream 12342   true chr8: 10367089-10379430 Medicago truncatula
Medtr8g028030 2.0kb downstream 2.0kb downstream 2000   false chr8: 10377431-10379430 Medicago truncatula
Medtr8g028030 5.0kb upstream 5.0kb upstream 15342   true chr8: 10362089-10377430 Medicago truncatula
Medtr8g028030 5.0kb upstream 5.0kb upstream 5000   false chr8: 10362089-10367088 Medicago truncatula
Medtr8g028030 5.0kb downstream 5.0kb downstream 15342   true chr8: 10367089-10382430 Medicago truncatula
Medtr8g028030 5.0kb downstream 5.0kb downstream 5000   false chr8: 10377431-10382430 Medicago truncatula
Medtr8g028030 10.0kb upstream 10.0kb upstream 20342   true chr8: 10357089-10377430 Medicago truncatula
Medtr8g028030 10.0kb upstream 10.0kb upstream 10000   false chr8: 10357089-10367088 Medicago truncatula
Medtr8g028030 10.0kb downstream 10.0kb downstream 20342   true chr8: 10367089-10387430 Medicago truncatula
Medtr8g028030 10.0kb downstream 10.0kb downstream 10000   false chr8: 10377431-10387430 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305656 5265 Fabidae View MSA
124050381 5270 Rosid View MSA
123750218 5271 Pentapetalae View MSA
122787219 5272 Eudicot View MSA
122050850 5273 Angiosperm View MSA
121349026 5274 Embryophyte View MSA
123425273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.699        
cufflinks 0.921        
cufflinks 1.419        
cufflinks 0.608       Low
cufflinks 1.693        
cufflinks 0.694       Low
cufflinks 1.831       High
cufflinks 0.993        
cufflinks 1.557        

0 Strain