Gene : Medtr8g027860 M. truncatula Mt4.0v1
Defline:  (1 of 108) PF03106 - WRKY DNA -binding domain (WRKY) Description:  WRKY family transcription factor
Genomic Order:  1343 Name:  ? Medtr8g027860
Secondary Identifier:  ? PAC:31074546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027860 0.5kb upstream 0.5kb upstream 3109   true chr8: 10193251-10196359 Medicago truncatula
Medtr8g027860 0.5kb upstream 0.5kb upstream 500   false chr8: 10193251-10193750 Medicago truncatula
Medtr8g027860 0.5kb downstream 0.5kb downstream 3109   true chr8: 10193751-10196859 Medicago truncatula
Medtr8g027860 0.5kb downstream 0.5kb downstream 500   false chr8: 10196360-10196859 Medicago truncatula
Medtr8g027860 1.0kb upstream 1.0kb upstream 3609   true chr8: 10192751-10196359 Medicago truncatula
Medtr8g027860 1.0kb upstream 1.0kb upstream 1000   false chr8: 10192751-10193750 Medicago truncatula
Medtr8g027860 1.0kb downstream 1.0kb downstream 3609   true chr8: 10193751-10197359 Medicago truncatula
Medtr8g027860 1.0kb downstream 1.0kb downstream 1000   false chr8: 10196360-10197359 Medicago truncatula
Medtr8g027860 2.0kb upstream 2.0kb upstream 4609   true chr8: 10191751-10196359 Medicago truncatula
Medtr8g027860 2.0kb upstream 2.0kb upstream 2000   false chr8: 10191751-10193750 Medicago truncatula
Medtr8g027860 2.0kb downstream 2.0kb downstream 4609   true chr8: 10193751-10198359 Medicago truncatula
Medtr8g027860 2.0kb downstream 2.0kb downstream 2000   false chr8: 10196360-10198359 Medicago truncatula
Medtr8g027860 5.0kb upstream 5.0kb upstream 7609   true chr8: 10188751-10196359 Medicago truncatula
Medtr8g027860 5.0kb upstream 5.0kb upstream 5000   false chr8: 10188751-10193750 Medicago truncatula
Medtr8g027860 5.0kb downstream 5.0kb downstream 7609   true chr8: 10193751-10201359 Medicago truncatula
Medtr8g027860 5.0kb downstream 5.0kb downstream 5000   false chr8: 10196360-10201359 Medicago truncatula
Medtr8g027860 10.0kb upstream 10.0kb upstream 12609   true chr8: 10183751-10196359 Medicago truncatula
Medtr8g027860 10.0kb upstream 10.0kb upstream 10000   false chr8: 10183751-10193750 Medicago truncatula
Medtr8g027860 10.0kb downstream 10.0kb downstream 12609   true chr8: 10193751-10206359 Medicago truncatula
Medtr8g027860 10.0kb downstream 10.0kb downstream 10000   false chr8: 10196360-10206359 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312862 5265 Fabidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.763     High High
cufflinks 10.017     High  
cufflinks 7.812        
cufflinks 7.056       Low
cufflinks 12.069     High High
cufflinks 8.645        
cufflinks 10.861     High  
cufflinks 6.474       Low
cufflinks 7.835        

0 Strain