Gene : Medtr8g028600 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Description:  1-aminocyclopropane-1-carboxylate synthase
Genomic Order:  1445 Name:  ? Medtr8g028600
Secondary Identifier:  ? PAC:31075584
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ETHYL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028600 0.5kb upstream 0.5kb upstream 4323   true chr8: 10965539-10969861 Medicago truncatula
Medtr8g028600 0.5kb upstream 0.5kb upstream 500   false chr8: 10965539-10966038 Medicago truncatula
Medtr8g028600 0.5kb downstream 0.5kb downstream 4323   true chr8: 10966039-10970361 Medicago truncatula
Medtr8g028600 0.5kb downstream 0.5kb downstream 500   false chr8: 10969862-10970361 Medicago truncatula
Medtr8g028600 1.0kb upstream 1.0kb upstream 4823   true chr8: 10965039-10969861 Medicago truncatula
Medtr8g028600 1.0kb upstream 1.0kb upstream 1000   false chr8: 10965039-10966038 Medicago truncatula
Medtr8g028600 1.0kb downstream 1.0kb downstream 4823   true chr8: 10966039-10970861 Medicago truncatula
Medtr8g028600 1.0kb downstream 1.0kb downstream 1000   false chr8: 10969862-10970861 Medicago truncatula
Medtr8g028600 2.0kb upstream 2.0kb upstream 5823   true chr8: 10964039-10969861 Medicago truncatula
Medtr8g028600 2.0kb upstream 2.0kb upstream 2000   false chr8: 10964039-10966038 Medicago truncatula
Medtr8g028600 2.0kb downstream 2.0kb downstream 5823   true chr8: 10966039-10971861 Medicago truncatula
Medtr8g028600 2.0kb downstream 2.0kb downstream 2000   false chr8: 10969862-10971861 Medicago truncatula
Medtr8g028600 5.0kb upstream 5.0kb upstream 8823   true chr8: 10961039-10969861 Medicago truncatula
Medtr8g028600 5.0kb upstream 5.0kb upstream 5000   false chr8: 10961039-10966038 Medicago truncatula
Medtr8g028600 5.0kb downstream 5.0kb downstream 8823   true chr8: 10966039-10974861 Medicago truncatula
Medtr8g028600 5.0kb downstream 5.0kb downstream 5000   false chr8: 10969862-10974861 Medicago truncatula
Medtr8g028600 10.0kb upstream 10.0kb upstream 13823   true chr8: 10956039-10969861 Medicago truncatula
Medtr8g028600 10.0kb upstream 10.0kb upstream 10000   false chr8: 10956039-10966038 Medicago truncatula
Medtr8g028600 10.0kb downstream 10.0kb downstream 13823   true chr8: 10966039-10979861 Medicago truncatula
Medtr8g028600 10.0kb downstream 10.0kb downstream 10000   false chr8: 10969862-10979861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297875 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169        
cufflinks 0.29        
cufflinks 1.085       High
cufflinks 0.09       Low
cufflinks 0.098       Low
cufflinks 1.458       High
cufflinks 0.734        
cufflinks 0.317        
cufflinks 0.327        

0 Strain