Gene : Medtr8g028450 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10994:SF70 - RETICULON-LIKE PROTEIN B4 Description:  seed maturation protein
Genomic Order:  1424 Name:  ? Medtr8g028450
Secondary Identifier:  ? PAC:31071342
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028450 0.5kb upstream 0.5kb upstream 3043   true chr8: 10788310-10791352 Medicago truncatula
Medtr8g028450 0.5kb upstream 0.5kb upstream 500   false chr8: 10790853-10791352 Medicago truncatula
Medtr8g028450 0.5kb downstream 0.5kb downstream 3043   true chr8: 10787810-10790852 Medicago truncatula
Medtr8g028450 0.5kb downstream 0.5kb downstream 500   false chr8: 10787810-10788309 Medicago truncatula
Medtr8g028450 1.0kb upstream 1.0kb upstream 3543   true chr8: 10788310-10791852 Medicago truncatula
Medtr8g028450 1.0kb upstream 1.0kb upstream 1000   false chr8: 10790853-10791852 Medicago truncatula
Medtr8g028450 1.0kb downstream 1.0kb downstream 3543   true chr8: 10787310-10790852 Medicago truncatula
Medtr8g028450 1.0kb downstream 1.0kb downstream 1000   false chr8: 10787310-10788309 Medicago truncatula
Medtr8g028450 2.0kb upstream 2.0kb upstream 4543   true chr8: 10788310-10792852 Medicago truncatula
Medtr8g028450 2.0kb upstream 2.0kb upstream 2000   false chr8: 10790853-10792852 Medicago truncatula
Medtr8g028450 2.0kb downstream 2.0kb downstream 4543   true chr8: 10786310-10790852 Medicago truncatula
Medtr8g028450 2.0kb downstream 2.0kb downstream 2000   false chr8: 10786310-10788309 Medicago truncatula
Medtr8g028450 5.0kb upstream 5.0kb upstream 7543   true chr8: 10788310-10795852 Medicago truncatula
Medtr8g028450 5.0kb upstream 5.0kb upstream 5000   false chr8: 10790853-10795852 Medicago truncatula
Medtr8g028450 5.0kb downstream 5.0kb downstream 7543   true chr8: 10783310-10790852 Medicago truncatula
Medtr8g028450 5.0kb downstream 5.0kb downstream 5000   false chr8: 10783310-10788309 Medicago truncatula
Medtr8g028450 10.0kb upstream 10.0kb upstream 12543   true chr8: 10788310-10800852 Medicago truncatula
Medtr8g028450 10.0kb upstream 10.0kb upstream 10000   false chr8: 10790853-10800852 Medicago truncatula
Medtr8g028450 10.0kb downstream 10.0kb downstream 12543   true chr8: 10778310-10790852 Medicago truncatula
Medtr8g028450 10.0kb downstream 10.0kb downstream 10000   false chr8: 10778310-10788309 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312395 5265 Fabidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.687       Low
cufflinks 4.056        
cufflinks 2.834        
cufflinks 5.189        
cufflinks 7.827        
cufflinks 3.122        
cufflinks 4.767        
cufflinks 2.49        
cufflinks 13.747     High High

0 Strain