Gene : Medtr8g014620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR16223:SF17 - BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED Description:  basic helix loop helix (bHLH) DNA-binding superfamily protein, putative
Genomic Order:  664 Name:  ? Medtr8g014620
Secondary Identifier:  ? PAC:31070370
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g014620 0.5kb upstream 0.5kb upstream 1160   true chr8: 4638822-4639981 Medicago truncatula
Medtr8g014620 0.5kb upstream 0.5kb upstream 500   false chr8: 4639482-4639981 Medicago truncatula
Medtr8g014620 0.5kb downstream 0.5kb downstream 1160   true chr8: 4638322-4639481 Medicago truncatula
Medtr8g014620 0.5kb downstream 0.5kb downstream 500   false chr8: 4638322-4638821 Medicago truncatula
Medtr8g014620 1.0kb upstream 1.0kb upstream 1660   true chr8: 4638822-4640481 Medicago truncatula
Medtr8g014620 1.0kb upstream 1.0kb upstream 1000   false chr8: 4639482-4640481 Medicago truncatula
Medtr8g014620 1.0kb downstream 1.0kb downstream 1660   true chr8: 4637822-4639481 Medicago truncatula
Medtr8g014620 1.0kb downstream 1.0kb downstream 1000   false chr8: 4637822-4638821 Medicago truncatula
Medtr8g014620 2.0kb upstream 2.0kb upstream 2660   true chr8: 4638822-4641481 Medicago truncatula
Medtr8g014620 2.0kb upstream 2.0kb upstream 2000   false chr8: 4639482-4641481 Medicago truncatula
Medtr8g014620 2.0kb downstream 2.0kb downstream 2660   true chr8: 4636822-4639481 Medicago truncatula
Medtr8g014620 2.0kb downstream 2.0kb downstream 2000   false chr8: 4636822-4638821 Medicago truncatula
Medtr8g014620 5.0kb upstream 5.0kb upstream 5660   true chr8: 4638822-4644481 Medicago truncatula
Medtr8g014620 5.0kb upstream 5.0kb upstream 5000   false chr8: 4639482-4644481 Medicago truncatula
Medtr8g014620 5.0kb downstream 5.0kb downstream 5660   true chr8: 4633822-4639481 Medicago truncatula
Medtr8g014620 5.0kb downstream 5.0kb downstream 5000   false chr8: 4633822-4638821 Medicago truncatula
Medtr8g014620 10.0kb upstream 10.0kb upstream 10660   true chr8: 4638822-4649481 Medicago truncatula
Medtr8g014620 10.0kb upstream 10.0kb upstream 10000   false chr8: 4639482-4649481 Medicago truncatula
Medtr8g014620 10.0kb downstream 10.0kb downstream 10660   true chr8: 4628822-4639481 Medicago truncatula
Medtr8g014620 10.0kb downstream 10.0kb downstream 10000   false chr8: 4628822-4638821 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121630120 5273 Angiosperm Singleton cluster - no MSA
122268533 5265 Fabidae Singleton cluster - no MSA
124009395 5270 Rosid Singleton cluster - no MSA
123583371 5271 Pentapetalae Singleton cluster - no MSA
122618073 5272 Eudicot Singleton cluster - no MSA
120902224 5274 Embryophyte Singleton cluster - no MSA
122942879 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131       High
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain