Gene : Medtr8g015660 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00240//PF13423 - Ubiquitin family (ubiquitin) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  733 Name:  ? Medtr8g015660
Secondary Identifier:  ? PAC:31073534
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015660 0.5kb upstream 0.5kb upstream 11118   true chr8: 5156420-5167537 Medicago truncatula
Medtr8g015660 0.5kb upstream 0.5kb upstream 500   false chr8: 5156420-5156919 Medicago truncatula
Medtr8g015660 0.5kb downstream 0.5kb downstream 11118   true chr8: 5156920-5168037 Medicago truncatula
Medtr8g015660 0.5kb downstream 0.5kb downstream 500   false chr8: 5167538-5168037 Medicago truncatula
Medtr8g015660 1.0kb upstream 1.0kb upstream 11618   true chr8: 5155920-5167537 Medicago truncatula
Medtr8g015660 1.0kb upstream 1.0kb upstream 1000   false chr8: 5155920-5156919 Medicago truncatula
Medtr8g015660 1.0kb downstream 1.0kb downstream 11618   true chr8: 5156920-5168537 Medicago truncatula
Medtr8g015660 1.0kb downstream 1.0kb downstream 1000   false chr8: 5167538-5168537 Medicago truncatula
Medtr8g015660 2.0kb upstream 2.0kb upstream 12618   true chr8: 5154920-5167537 Medicago truncatula
Medtr8g015660 2.0kb upstream 2.0kb upstream 2000   false chr8: 5154920-5156919 Medicago truncatula
Medtr8g015660 2.0kb downstream 2.0kb downstream 12618   true chr8: 5156920-5169537 Medicago truncatula
Medtr8g015660 2.0kb downstream 2.0kb downstream 2000   false chr8: 5167538-5169537 Medicago truncatula
Medtr8g015660 5.0kb upstream 5.0kb upstream 15618   true chr8: 5151920-5167537 Medicago truncatula
Medtr8g015660 5.0kb upstream 5.0kb upstream 5000   false chr8: 5151920-5156919 Medicago truncatula
Medtr8g015660 5.0kb downstream 5.0kb downstream 15618   true chr8: 5156920-5172537 Medicago truncatula
Medtr8g015660 5.0kb downstream 5.0kb downstream 5000   false chr8: 5167538-5172537 Medicago truncatula
Medtr8g015660 10.0kb upstream 10.0kb upstream 20618   true chr8: 5146920-5167537 Medicago truncatula
Medtr8g015660 10.0kb upstream 10.0kb upstream 10000   false chr8: 5146920-5156919 Medicago truncatula
Medtr8g015660 10.0kb downstream 10.0kb downstream 20618   true chr8: 5156920-5177537 Medicago truncatula
Medtr8g015660 10.0kb downstream 10.0kb downstream 10000   false chr8: 5167538-5177537 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299922 5265 Fabidae View MSA
124066467 5270 Rosid View MSA
123739899 5271 Pentapetalae View MSA
122787327 5272 Eudicot View MSA
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.936        
cufflinks 11.343     High High
cufflinks 7.925        
cufflinks 4.5       Low
cufflinks 8.435        
cufflinks 4.649       Low
cufflinks 6.783        
cufflinks 9.494     High  
cufflinks 6.856        

0 Strain